| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0029 |
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| Symbol | |
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| ID | 4463407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosaeta thermophila PT |
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| Kingdom | Archaea |
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| Replicon accession | NC_008553 |
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| Strand | + |
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| Start bp | 27132 |
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| End bp | 29762 |
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| Gene Length | 2631 bp |
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| Protein Length | 876 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639699037 |
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| Product | DNA-directed RNA polymerase subunit A' |
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| Protein accession | YP_842472 |
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| Protein GI | 116753354 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02390] DNA-directed RNA polymerase subunit A' |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.358518 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGTTC CAAAGAGGAT TGGAAAGATA AGGTTCGGCC TGATATCTCC GCAGGAGTTC
AGGAAGATGA GCGTGGTCAA GGTGATCACG GCCGATACCT ACGATGATGA TGGCTTTCCC
ATAGAGATGG GTCTGATGGA CCCCAGGCTC GGCGTCATAG ATCCTGGTCT CCGATGCAGA
ACATGCGGCG GCAGGCCCGG GGAGTGCCCC GGACACTTCG GACACATCGA TCTCGTGGCT
CCGGTGATAC ACGTTGGCTT CGCGAAACTC ATCAGGAAGA TCCTGAGAGC GATATGCAGG
GAGTGTTCAA AGCTCATGCT CTCCGAGCTG GAGAAGAAGG AGTTTCTCAG GCAGATAAGA
ACGCTTGAGG ATCTCGGGCA GCCCACAGAG GATGTTGTGA ACAAGGTCTT CGCAGAGGCA
AGGAAGCACA AGACCTGCCC GTACTGCGGT GCCCCTCAGA GGGAGATCAA GTTCGAGCGG
CCGCTCTCAT ATATAGAGGA CGGACACAAG CTCACGCCCT CTGACATAAG AGACAGGTTC
GAGAGGATCT CCGACGAGGA CATAATGGTC ATGGGGATGA ACCCGGAGAC GGCAAGGCCT
GAGTGGACGA TACTCACGGT GCTGCCAGTG CCTCCTGTCA CAATGAGACC ATCTATAACG
CTGGAGAGCG GACAGAGGAG TGAGGACGAC CTGACACACA AGCTCGTGGA TATAATAAGA
ATAAACCAGC GATTCCAGGA GAACCGAGAG GCAGGTGCGC CGCAGCTGAT AATCGAGGAC
CTCTGGGAGC TTCTCCAGTA CCACGTCACG ACATTCCTGG ATAACACTGT TTCAGGGGTA
CCTCCAGCCA GGCACAGAAG CGGCAGGCCC CTCAAGACAC TCTCGCAGAG GCTCAAGGGC
AAGGAGGGGA GGTTCAGAGG CTCTCTCTCC GGAAAGAGGG TCAACTTCAG CGCGCGAACT
GTAATATCTC CATATCCAAA CCTCTCAATA AACGAGGTCG GGGTTCCGAT CGAGGTTGCA
AAGGAACTCA CAGTCCCGAT AATGGTCACC CCAAAAAATA TCGAGGTCGT CAGGAAGTAC
GTGATGCGGG GGCCAGACAA CCATCCTGGT GTCAATTACG TAACACGTGC AGATGGGAGG
AGAGTCAAGG TCACCGAGAG AAACTGCCAG GAGGTCGCGG AGCAGCTCGA GGTTGGCTGG
AAGGTGGACA GGCAGCTTGC AGATGGTGAT ATCGTTCTCT TCAACCGGCA GCCCTCGCTC
CACAGGATGT CGATAATGGC GCACAGGGTC AAGGTCATGC CGTACAAGAC ATTCAGGCTG
AACCCAGCGG TATGCCCGCC GTACAACGCA GACTTCGATG GCGACGAGAT GAACCTCCAT
GTGCCACAGA CAGAGGAGGC GAGGGCAGAG GCTGAGATCC TGATGCGGGT CCAGGAGAAC
ATCCTCTCCC CCAGATTCGG CGGCCCGATC ATAGGCGGGA TACACGATTA TGTCACCGGA
AGCTTCCTGC TCACCCACAA GGAGCGCAGG CTCAATAAGG ACAGACTCAT GGAGGTTCTC
AAGAAGCTTG ATATAAGCGA CATCCCTGTG CCTGCAGGAT ATGACGAGAA CGGCGATCCG
TACTGGACAG GAAAGCAGAT ATTCAGCCTG ATACTGCCAA AGGATCTTAA CCTCACGTTC
AAGGCAGACT TCTGCAGCAA CTGCCCTGTC TGCAAGGGCG AGGATTGCGA GAATGATGCG
TATGTGGTTA TACGCAACGG CGTCCTTCTC AAGGGCACGA TCGATGCAGA GGCTGTGGGC
GCCTTCAAGG GGAAGGTGAT AGATCGCATA ATAAAGGAGT ATGATCCAGG GGTTGCGAGC
CAGTTCCTGG ACAGGATGAC GCTCCTGGCG CTCCGCGGGA TCATGCTCGC CGGCTTCAGC
TTCGGCATCA GTGACGAGGA TGTGCCAAGA GAGGCTGCAG AGCAGATCCA GGATGTCACA
AGATCCGCGA AGGAGAGTGT CCAGAGGCTT ATAGAGGCTT ACAGGGCGGG AGAGCTGGAA
CCGCTTCCCG GACGCACTCT TGAGGAGACG CTGGAGATGC GCATAATGCA GACGCTGGGC
AAGGCGAGGG ATGCTGCTGG ACAGATCGCA GGCCGTTACC TCGGACTGGA CAACAGCGGC
GTGGTCATGG CGGTCTCCGG CGCCCGCGGC TCGATGCTGA ACCTAACGCA GATGGCAGCA
TGTGTGGGCC AGCAGTCGGT CAGGGGCGAG AGGATAAAGC GCGGCTACAC TGATAGAACC
TTACCACACT TCAAGCGCGG AGATCTCGGC GCCGAGGCTC ATGGCTTCGT CGAGTCGAGC
TACAAGAAGG GTTTATCGCC GACTGAGTTC TTCTTCCATG CGATAGGTGG CAGGGAGGGT
CTTGTGGACA CCGCGATAAG AACATCCCAG AGCGGCTACC TCCAGAGGCG CCTGGTAAAC
GCCCTACAGG ACCTGGAGGT GAACTACGAC GGCACCGTCA GGGAGACCCG CGGCATGATC
GTCCAGTTCA AGTACGGAGA GGACGGGGTC GATCCATCTA GGAGAGACTA CGCAAGCCCG
GAGAACGTGC ATCGAATAAT AAGAAAGGTC CTCGCGGGTG AGAACGCATG A
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| Protein sequence | MSVPKRIGKI RFGLISPQEF RKMSVVKVIT ADTYDDDGFP IEMGLMDPRL GVIDPGLRCR
TCGGRPGECP GHFGHIDLVA PVIHVGFAKL IRKILRAICR ECSKLMLSEL EKKEFLRQIR
TLEDLGQPTE DVVNKVFAEA RKHKTCPYCG APQREIKFER PLSYIEDGHK LTPSDIRDRF
ERISDEDIMV MGMNPETARP EWTILTVLPV PPVTMRPSIT LESGQRSEDD LTHKLVDIIR
INQRFQENRE AGAPQLIIED LWELLQYHVT TFLDNTVSGV PPARHRSGRP LKTLSQRLKG
KEGRFRGSLS GKRVNFSART VISPYPNLSI NEVGVPIEVA KELTVPIMVT PKNIEVVRKY
VMRGPDNHPG VNYVTRADGR RVKVTERNCQ EVAEQLEVGW KVDRQLADGD IVLFNRQPSL
HRMSIMAHRV KVMPYKTFRL NPAVCPPYNA DFDGDEMNLH VPQTEEARAE AEILMRVQEN
ILSPRFGGPI IGGIHDYVTG SFLLTHKERR LNKDRLMEVL KKLDISDIPV PAGYDENGDP
YWTGKQIFSL ILPKDLNLTF KADFCSNCPV CKGEDCENDA YVVIRNGVLL KGTIDAEAVG
AFKGKVIDRI IKEYDPGVAS QFLDRMTLLA LRGIMLAGFS FGISDEDVPR EAAEQIQDVT
RSAKESVQRL IEAYRAGELE PLPGRTLEET LEMRIMQTLG KARDAAGQIA GRYLGLDNSG
VVMAVSGARG SMLNLTQMAA CVGQQSVRGE RIKRGYTDRT LPHFKRGDLG AEAHGFVESS
YKKGLSPTEF FFHAIGGREG LVDTAIRTSQ SGYLQRRLVN ALQDLEVNYD GTVRETRGMI
VQFKYGEDGV DPSRRDYASP ENVHRIIRKV LAGENA
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