| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0028 |
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| Symbol | |
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| ID | 4463406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosaeta thermophila PT |
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| Kingdom | Archaea |
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| Replicon accession | NC_008553 |
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| Strand | + |
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| Start bp | 25309 |
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| End bp | 27123 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639699036 |
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| Product | DNA-directed RNA polymerase subunit B' |
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| Protein accession | YP_842471 |
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| Protein GI | 116753353 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR03670] DNA-directed RNA polymerase subunit B |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.274287 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCTGATG CCAGGGTTTT CATAAATGGA GAGATAGTCG GGCATCATCC GGAGCCCGAG
AAGCTCGTGG CCGAGATCAG GCGTTTGAGA AGAGCCGGCG TGATAAGCAA TCAGATCAAT
GTCGCATACT ACGACAGAAC AAACGAGATT GTGATAAACA CAGACTCTGG AAGGGCGAGA
AGGCCTCTTA TCATCGTGGA GAACGGACAG CCCCTTGTCA CAGAGGAGGA TATTCGGAGA
CTGGAGCGGG GAGAGGCGAC CTTTGATGAT CTTGTTCGAG AGGGAAAGAT TGAGTATCTC
GATGCCGAGG AGGAGGAGAA TGCCTACATA GCGATCTGGG AGAATGATCT CACAGAGGAG
CATACGCATC TCGAGGTCGA TCCGTCTCTA ATCCTGGGGA TATGCACAGC ACTGGTCCCG
TACCCGGAGC ACAACGCGAG CCCGAGGAAT ACCATGGGCG CCGGCATGAT CAAGCAGTGT
CTTGGCTTCC CGATGGCGAA CATCCGCCTG AGACCTGACA CACGGGGCCA CTATCTCCAT
TACCCACAGC AGCCCATTGT CAGTACAAGA ACCGCCAAGG CAATCGGTTT CGATAAAAGG
CCAGCGGGCC AGAACTTCGT CGTGGCGGTT CTCGCATACG AGGGGTACAA CATCGAGGAC
GCCCTGGTGA TGAACAAGAG CGCCGTCGAG CGCGGGCTTG CCAGATCTCA TTTCTTCAGA
GTATCAGAGG CAGAGGAGAG GAAATACCCT GGGGGTCAGG AGGACAAGTT TGAAATTCCC
GATCTCGAGG TCAGGGGCGC GAGGGGCTCT GAGACCTACG GCCAGCTCGA TGCCGACGGT
CTTGTAAATC CGAACGCTGA TGTCGGTCCC AACGATGTGC TTATAGGCAA GACGAGCCCG
CCGAGGTTCC TTGAGGAGCC GACAGAGTTC GGAATCAGCC CGCAGCAGAG GCGCGAGACT
TCTGTCACGA TGAGGTCCAA CGAGAAGGGC GTCGTCGATC TGGTCATCCT CACAGAATCG
CAGAACGGCA ACCGGCTCGC CAAGGTAAAA ACCCGTGACC AGAGGATCCC CGAGCTAGGA
GACAAGTTCG CATCACGCCA CGGTCAGAAG GGTGTTGTGG GTCTTCTTCT CCCCCAGGAG
GATATGCCGT TCAGCGAGAG CGGCATGGTC CCGGATCTTC TTCTCAACCC GCACGCAATC
CCATCGAGAA TGACAGTCGG GCACGTCCTC GAGATGATCG GCGGGAAGGT GGGTTCGCTT
GAGGGAAGGT TCATAGATGC GACCGCGTTT CTCGGAGAGA AGGAGTGGGA TCTCAGGAGC
GCTCTGACAA GGCTAGGATT CGCCCATACA GGAAAAGAGG TTCTGTACGA TGGAGCGACC
GGCGAGAGGA TACAGGCCGA CATATTTGTC GGGGTGATCC TGTACCAGAA GCTGTACCAC
ATGGTCACCG GAAAGATGCA TGCGAGATCA CGCGGCCCTG TGCAGGTGCT CACCAGGCAG
CCGACAGAGG GCAGGGCTAG AGAGGGCGGA CTGAGGTTCG GAGAGATGGA ACGCGATGTG
CTCATAGCCC ATGGCGCTGC TCTTGCGCTG AAGGAGAGGC TCGTCGAGGA GTCAGATAAA
GTAACGGAAC TCGTGTGCAG CAAATGCGGA GTCATAGCGA TTCACGATCG GAGAAGAAAT
ATGGACCTCT GCCCAGTCTG CGGCACGGAC ACCGACATAT ACCCCGTGGA GATGAGCTAT
GCGTTCAAGC TTCTGCTTGA CGAGATAAAA TCGCTGGGCG TGGCACCGCG CCTCATGCTG
GAGGATGCAG TTTAG
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| Protein sequence | MADARVFING EIVGHHPEPE KLVAEIRRLR RAGVISNQIN VAYYDRTNEI VINTDSGRAR
RPLIIVENGQ PLVTEEDIRR LERGEATFDD LVREGKIEYL DAEEEENAYI AIWENDLTEE
HTHLEVDPSL ILGICTALVP YPEHNASPRN TMGAGMIKQC LGFPMANIRL RPDTRGHYLH
YPQQPIVSTR TAKAIGFDKR PAGQNFVVAV LAYEGYNIED ALVMNKSAVE RGLARSHFFR
VSEAEERKYP GGQEDKFEIP DLEVRGARGS ETYGQLDADG LVNPNADVGP NDVLIGKTSP
PRFLEEPTEF GISPQQRRET SVTMRSNEKG VVDLVILTES QNGNRLAKVK TRDQRIPELG
DKFASRHGQK GVVGLLLPQE DMPFSESGMV PDLLLNPHAI PSRMTVGHVL EMIGGKVGSL
EGRFIDATAF LGEKEWDLRS ALTRLGFAHT GKEVLYDGAT GERIQADIFV GVILYQKLYH
MVTGKMHARS RGPVQVLTRQ PTEGRAREGG LRFGEMERDV LIAHGAALAL KERLVEESDK
VTELVCSKCG VIAIHDRRRN MDLCPVCGTD TDIYPVEMSY AFKLLLDEIK SLGVAPRLML
EDAV
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