| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0027 |
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| Symbol | |
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| ID | 4463405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosaeta thermophila PT |
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| Kingdom | Archaea |
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| Replicon accession | NC_008553 |
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| Strand | + |
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| Start bp | 23826 |
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| End bp | 25316 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639699035 |
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| Product | DNA-directed RNA polymerase subunit beta'' |
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| Protein accession | YP_842470 |
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| Protein GI | 116753352 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.483388 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTGGACA GAAGCGTTCT TTACAGGGCC TATTTTACCA AGGACAAGTT GGTGCACCAC
CACATAAATT CATTCAACGA ATTCATAGAC AGAGGTCTGC AGAAGGTTAT CGATGAGGTC
AGGATAATAG AGACGAACAT CGAGAACACC TACGTCAAGC TCGGCAAGAT CAGGGTGGAG
AAGCCTGTGG TCATGGAGGC TGACGGATCT GTCGAGAGGC TCTATCCGAA CGATGCCCGT
CTCAGGAACC TGACCTATGC GTCGCCAATA AAGCTCGAGA TGTCCATAGT CGACAGGGGC
GAGGAGAAGG AGCCGGTCGA GGCGATGATC GGCATGCTCC CGATCATGGT GATGTCGAAG
GTCTGCAACC TCTACGGCAT GAGCGAGGAG GAGATGGTCT CCTACGGAGA GGATCCCCTC
GATCCTGGAG GATACTTTAT AGTGAACGGA TCCGAGCGCG TCATAATGAC GCTCGAGGAT
CTGGCGCCGA ACAAGATACT CGTGGAGTAC AATCAGAGGT ACGATGAGTT CATAGAGGTT
GCGAAGGTCT TCAGCCAGAG GCAGGGCTAC AGGTCTCTCG TCATAGTGGA GCGCGGCAAG
CGATCGATAC TAGAGGTCTC ATTCCCGTCT GTCGCTGGCA GGATAAACTT CGTGACTCTT
GTAAGAGCCC TCGGACTCGA GACTGATATG GACATAGTGA AGGCCGTATC AGATAACCCC
GAGATCATGA AGTTCATGCT CGAGAACCTC GAGGAGGCTG AAGTCTCGAC GACAGAAGAG
GCCCTGGAGA AGATAGGCAA CAGGGTCGCG GCCGGCCAGG CGAAGGAGTA CCAGAAGAAG
CGTGCCGCTT ATGTCCTGGA CAGATACCTG CTTCCGCATA TAGGAGTGGA GGAGAAGGAC
AGGTACGCTA AGGCTCTCTT CCTCTCAAGA ATGGCTGAGG CGTGCTTCGA GCTGGCGCTT
GGTAAAAGAG GAGAGGACGA CAAGGACCAC TATGCGAATA AGAGGCTGAA GCTCTCCGGA
GACCTGATGG AAGATCTCTT CAGGGTCGCA TTCAACAGGC TCACCAGGGA TATCAAGTAC
CAGCTCGAGC GCGCCAGCAT GCGCAACAGG GAGCTGAATG TCATCACCAC AGTGAGAGCG
GATGTTCTGA CGGAGAGGAT GATACATCCT CTCGCAACAG GCAACTGGGT TGGTGGCAGG
ACCGGCGTAT CGCAGCTTCT GGATAGAACG GATTACATGG CGAGCCTGAG CCATCTCAGG
AGGGTCATAT CGCCGCTATC GAGATCGCAG CCGCACTTTG AGACCAGGGA TCTCCATGCG
ACACAGTGGG GAAGGATATG CCCGAGCGAG ACTCCCGAGG GGCCGAACTG CGGGCTGGTC
AAGAACTTCG CTCAGGGAGT TGAGCTCTCA AAGGGCGTTG AGGATTACGA AGAGGTCAAG
ACCATGCTGA TCAATCTCGG TGTGAGGCCG GTAGGTGGTT ATGGTGGCTG A
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| Protein sequence | MLDRSVLYRA YFTKDKLVHH HINSFNEFID RGLQKVIDEV RIIETNIENT YVKLGKIRVE
KPVVMEADGS VERLYPNDAR LRNLTYASPI KLEMSIVDRG EEKEPVEAMI GMLPIMVMSK
VCNLYGMSEE EMVSYGEDPL DPGGYFIVNG SERVIMTLED LAPNKILVEY NQRYDEFIEV
AKVFSQRQGY RSLVIVERGK RSILEVSFPS VAGRINFVTL VRALGLETDM DIVKAVSDNP
EIMKFMLENL EEAEVSTTEE ALEKIGNRVA AGQAKEYQKK RAAYVLDRYL LPHIGVEEKD
RYAKALFLSR MAEACFELAL GKRGEDDKDH YANKRLKLSG DLMEDLFRVA FNRLTRDIKY
QLERASMRNR ELNVITTVRA DVLTERMIHP LATGNWVGGR TGVSQLLDRT DYMASLSHLR
RVISPLSRSQ PHFETRDLHA TQWGRICPSE TPEGPNCGLV KNFAQGVELS KGVEDYEEVK
TMLINLGVRP VGGYGG
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