Gene Mthe_0024 details

Gene Information

• Locus tag: Mthe_0024
• Symbol: leuD
• ID: 4463402
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanosaeta thermophila PT
• Kingdom: Archaea
• Replicon accession: NC_008553
• Strand: +
• Start bp: 21765
• End bp: 22250
• Gene Length: 486 bp
• Protein Length: 161 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 639699031
• Product: 3-isopropylmalate dehydratase small subunit
• Protein accession: YP_842467
• Protein GI: 116753349
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0066] 3-isopropylmalate dehydratase small subunit
• TIGRFAM ID: [TIGR02087] 3-isopropylmalate dehydratase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.321106
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGCACGAG CCTGGAAGTT CGGAAACGAT ATCGACACGG ATGTGATCAT CCCTGGGCGC 
TATCTTGTGA TAAATGATCC AGAGGAGCTG GCCAAGCACC TCTTTGAGGG GATCAGGCCG 
GAGTTCGCGG AGAGCGTTCG ACATGGAGAT ATCATAGTCG CTGGAACCAA CTTCGGGTGT 
GGTTCATCCA GAGAGCATGC TCCTCTTGCC ATCAAGGCAG CCGGGGTGGA GGCGGTCATT 
GCAAGGTCCT TTGCACGGAT TTTCTTCAGG AATTCAATAA ATATAGGGTT GCCTCTGCTC 
ATCTGCGCGG ATGCGGAGAA AATAGACGAT GGCGACTCTG TGGTGGTGGA TATCTCCAGG 
GGCATCGTTC AGAACATCTC CAAGAAGGAG TCTTATCCGA CAACACCGCT GCCCCCGTTC 
CTCCAGGAGA TAGTGAGGTC GGGAGGTCTT TTAAATTATA CAAAGAAACA GGTGGTGAGA 
GCATGA 

 

Protein sequence

MARAWKFGND IDTDVIIPGR YLVINDPEEL AKHLFEGIRP EFAESVRHGD IIVAGTNFGC 
GSSREHAPLA IKAAGVEAVI ARSFARIFFR NSINIGLPLL ICADAEKIDD GDSVVVDISR 
GIVQNISKKE SYPTTPLPPF LQEIVRSGGL LNYTKKQVVR A