| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0016 |
|---|
| Symbol | |
|---|
| ID | 4462254 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | + |
|---|
| Start bp | 12657 |
|---|
| End bp | 13691 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639699023 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | YP_842459 |
|---|
| Protein GI | 116753341 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2108] Uncharacterized conserved protein related to pyruvate formate-lyase activating enzyme |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.238462 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGAGA AATGGGTTCA CGACGCTACA GGATCGTTTC ACAACTACCT CCCTCCAGGA
TGTGAGATAT GCAGGCAGGG TGCATCCCTG GTCCTGTTCG TGACGGGTGT ATGTACCAGA
GGGTGCTTCT ACTGCCCGCT CTCTGTGGAG CGAAGGGGCA GGGAGATTAT CTTCGCGAAT
GAGCGGATCG TCTCATCTCC GAAGGATATC CTGGAGGAGG CACGGGCGAT CGATGCCCTC
GGCACAGGCA TAACCGGCGG AGAGCCTCTG TTCAAGCTGG ATCTGGTTCT GGACACAATT
CGCATGCTGA AAAGGAATCT GGGAAGCGAG CATCACATCC ACCTCTACAC GGGAATCGTG
CCTGGGGAGA GCGTGCTTTC AAAGCTTCGC AAGGCAGGTC TGGACGAGCT GAGGATTCAC
CCCGATCCCG AGCAGGAGGA CGTCCGCCTT GTAGGAGTAC TCAAATCCGC GAGGAACCTC
GGGATAGAGG CTGGCGTGGA GATCCCGGCG ATCGCACCTG CACCGTGGAT CGCAGAGGCT
GTGCAGAGCG CCGGTGCTTT TCTCAACATA AATGAACTCG AGTTCTCCGA GACGAATGCG
GATATGCTCA GAGCCAGAGG ATTCAGGGTG AATCCGAACT CGTGCGCCGC GATCGGGAGC
GAGTCGATCG CCAGGTCGTT CATGCATTAC GGGATAAAGC TCCACTACTG TTCCTCCGTC
TTCAAGGATT CCGTCCAGCT CAGGGAGAGG CTGAAGCGGC GCGCTGAGAG GATCAGGAGG
GCGTTTGATA TCGTGAGCGA TGATGGCACT TTATTGACAG GCATCATCCT CGCTTCGGAT
CTCCAGGCTG CGATCAGAGT CCTTGAGAAT CTGGGTGTCC CGGAGAGCAT GTACGAGCTC
GCGGATAATG GGATAGAGAT CGCGGCCTGG ATACTCGAGG AGATCGCAGA TGAGGTGAGG
CAGATCGGAT CTCCTCAGAT AGTTGAGAGG TATCCAACAG AGGATGGGCT GGTCGTGGAG
AGAATACCTT TATAA
|
|---|
| Protein sequence | MPEKWVHDAT GSFHNYLPPG CEICRQGASL VLFVTGVCTR GCFYCPLSVE RRGREIIFAN
ERIVSSPKDI LEEARAIDAL GTGITGGEPL FKLDLVLDTI RMLKRNLGSE HHIHLYTGIV
PGESVLSKLR KAGLDELRIH PDPEQEDVRL VGVLKSARNL GIEAGVEIPA IAPAPWIAEA
VQSAGAFLNI NELEFSETNA DMLRARGFRV NPNSCAAIGS ESIARSFMHY GIKLHYCSSV
FKDSVQLRER LKRRAERIRR AFDIVSDDGT LLTGIILASD LQAAIRVLEN LGVPESMYEL
ADNGIEIAAW ILEEIADEVR QIGSPQIVER YPTEDGLVVE RIPL
|
|---|
| |