| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6878 |
|---|
| Symbol | |
|---|
| ID | 4454918 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008545 |
|---|
| Strand | + |
|---|
| Start bp | 95820 |
|---|
| End bp | 96230 |
|---|
| Gene Length | 411 bp |
|---|
| Protein Length | 136 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639698940 |
|---|
| Product | PilT domain-containing protein |
|---|
| Protein accession | YP_840500 |
|---|
| Protein GI | 116687254 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 0.425666 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTGT ATTTGCTCGA CACCAACATA CTGTCGAACG TGATCCGCGA CCCGCGCGGC
GCATGCGCCA CGCGGATTGG AGAGACCCCG CCGGAGCAAG TGTGCACCTC GATCGTCGTC
GCTGCGGAAC TGCGATTCGG CGTCTGGAAG CGCGGCTCGT CAACGCTCGC GCAGCGCGTC
GAGCAACTGC TCGCGAGCTT GACCGTGTTG CCGCTGCAGC CCGACGCGGA CCGCTGCTAC
GGGCGGCTGC GGGCCGAGCT CGAAAAGCAA GGGCAGCTGA TCGGCGCCAA CGACATGCTG
ATCGCCGCTC ACGCGCTGGC CGTCGACGCC GTGCTGGTCA CCGACAACAC GGCTGAATTT
ACCCGTGTCG CCGGGCTGCC GGTCGAAAAC TGGCTGCGAT CGGCAACGTA A
|
|---|
| Protein sequence | MTLYLLDTNI LSNVIRDPRG ACATRIGETP PEQVCTSIVV AAELRFGVWK RGSSTLAQRV
EQLLASLTVL PLQPDADRCY GRLRAELEKQ GQLIGANDML IAAHALAVDA VLVTDNTAEF
TRVAGLPVEN WLRSAT
|
|---|
| |