Gene Bcen2424_6781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6781 
Symbol 
ID4454674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp1048096 
End bp1048629 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content66% 
IMG OID639698843 
ProductTadE family protein 
Protein accessionYP_840403 
Protein GI116687156 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4961] Flp pilus assembly protein TadG 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0179995 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.123574 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGC CGCCGATTCG TCGTTCGCGC ACCCGTGGCG TCGTCGCCGT CGAGTTCGCG 
CTCGTGCTGA TGCCGATGAT CATGCTCGCG ACGGGCGTGG CCGAGTTCGG TCGCGCGATC
TACCAGTACG AGACGCTGAC CAAGGCCACG CGCGATGCGG CACGCTACCT GTCGGTCTGG
CTGCCGACCG ACAGCGCGTA TCCGGTGTCG CAGGCGCAGT GTCTCGTCGT GTACGGCAGC
ACGACGTGCG GCTCGTCGGG CACCGAGCTG GTGCCCGGGC TCACGACGTC GATGGTCACG
ATCTGCGACG CACAGCGCAC GACCGGCTGC AGCGATGCGT CCGACCCGTC GCAGTTCGCG
AACCTGCCGA CCTACGATTC GAACAACAAC GCGGCGAGCG GCACGGCCAC GGGCGCGATC
AACGTCGTCG AAGTGAAGAT CTCGGGCTAC CAGTACCAGC CGATCCCCGC GTACCCGTGG
CTGCCGTCGA TCACCTTCGG CAACATCGTC ACCGTGATGA GGCAGGTGTC ATGA
 
Protein sequence
MKKPPIRRSR TRGVVAVEFA LVLMPMIMLA TGVAEFGRAI YQYETLTKAT RDAARYLSVW 
LPTDSAYPVS QAQCLVVYGS TTCGSSGTEL VPGLTTSMVT ICDAQRTTGC SDASDPSQFA
NLPTYDSNNN AASGTATGAI NVVEVKISGY QYQPIPAYPW LPSITFGNIV TVMRQVS