Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_6781 |
Symbol | |
ID | 4454674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008544 |
Strand | - |
Start bp | 1048096 |
End bp | 1048629 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639698843 |
Product | TadE family protein |
Protein accession | YP_840403 |
Protein GI | 116687156 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4961] Flp pilus assembly protein TadG |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0179995 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.123574 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAGC CGCCGATTCG TCGTTCGCGC ACCCGTGGCG TCGTCGCCGT CGAGTTCGCG CTCGTGCTGA TGCCGATGAT CATGCTCGCG ACGGGCGTGG CCGAGTTCGG TCGCGCGATC TACCAGTACG AGACGCTGAC CAAGGCCACG CGCGATGCGG CACGCTACCT GTCGGTCTGG CTGCCGACCG ACAGCGCGTA TCCGGTGTCG CAGGCGCAGT GTCTCGTCGT GTACGGCAGC ACGACGTGCG GCTCGTCGGG CACCGAGCTG GTGCCCGGGC TCACGACGTC GATGGTCACG ATCTGCGACG CACAGCGCAC GACCGGCTGC AGCGATGCGT CCGACCCGTC GCAGTTCGCG AACCTGCCGA CCTACGATTC GAACAACAAC GCGGCGAGCG GCACGGCCAC GGGCGCGATC AACGTCGTCG AAGTGAAGAT CTCGGGCTAC CAGTACCAGC CGATCCCCGC GTACCCGTGG CTGCCGTCGA TCACCTTCGG CAACATCGTC ACCGTGATGA GGCAGGTGTC ATGA
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Protein sequence | MKKPPIRRSR TRGVVAVEFA LVLMPMIMLA TGVAEFGRAI YQYETLTKAT RDAARYLSVW LPTDSAYPVS QAQCLVVYGS TTCGSSGTEL VPGLTTSMVT ICDAQRTTGC SDASDPSQFA NLPTYDSNNN AASGTATGAI NVVEVKISGY QYQPIPAYPW LPSITFGNIV TVMRQVS
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