Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_6752 |
Symbol | |
ID | 4454318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008544 |
Strand | - |
Start bp | 998519 |
End bp | 999946 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639698814 |
Product | major facilitator transporter |
Protein accession | YP_840374 |
Protein GI | 116687127 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0303663 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTCGA TCGATCTTGG CTCAGTCACG CCGGTTTCTT CCCCCATCCG CTCGGCCAGC GACGTCGCGC GCCTGATCAA TACGGTGGAC AGTTCGGTGA GCCACGCACG GATGATCGTG CTGCTGGCGC TCGGCGGCGT GTTTCTCGAT GCGTACGACC TCACGACGCT GTCGTACGGC ATCGACGACG TGGCGCGCGA ATTCGGGCTG ACGCCCGCGC TGACCGGGCT GGTCGGTTCG GCGATCATGA TCGGCACGAT CTTCGGCAGC CTGATCGGCG GCTGGCTGAC CGACCGGATC GGCCGCTACC AGGTGTTCAT GGCCGACATG CTGTTCTTCG TGGTCGCGGC GATCGCGGCC GGGCTCGCAC CGAACGTGTG GGTGCTGATC GGCGCCCGCT TCGTGATGGG GCTCGGCGTC GGCATCGACC TGCCCGTCGC GATGGCGTTT CTCGCGGAAT TCTCGAAGTT CAACGGTCGC GGCAACAAGG CGTCGCGGCT CGCCGCGTGG TGCCCGATGT GGTACGTCGC GTCGTCGGTG TGCTTCCTGC TGATCTTCGG CCTGTATTTC CTGCTGCCGG CCGAGCATGC GGGCTGGCTG TGGCGCGCCT CGCTGATCTT CGGCGCGGTG CCGGCGCTCG TCATCATCCT GTTCCGCAAC CGCTTCATGA ACGAATCGCC GCTGTGGGCC GCGAATCAGG GCGACCTGGC CAACGCAGCG CGCATCCTGC GCGAGTCGTA CGGCATTCAC GCGCACGAAG CGGACGATGC GCGGCGCGAA CCGAGCCCGC CGCCGGTGCG GATTCGCGTG CTGTTCCAGC GTCCGTATCT GGGGCGCACG ATCGTCGCCA GCGTGATGAA CCTGTGCATC CCGTTCGAAT ACACGGCGAT CGCGTTCTTC CTGCCGTCGA TCCTGTCGCA ATTCCTCGGC GCGGGCGTGT TCGAGACGAT CGCGGCGTCG CTCGCATTGA ACGTGCTGTT CGCGTTCACC GGCGGCTTGC TCGGCATGCG CCTCGCGTAT CGCTATCCGT CACGGCATGT CGCGATCGCG GGGTTTGCGT TGCAAACGGT CGCGCTCGTC GCGCTGGCGC TGGCGGGGCA TCCGCACGGT GCATTGGCGG TCGGCGTCGT GCTGCTGATG CTCGGTACCT GGCTGTTCGC CGAAGGTTTC GGGCCGGGCG CGCAGATGAT GATCTATCCG ACGCTGTCGT ATCCGGCCGC GATCCGCGGC ACCGGCGTCG GCTTCGGGCG GTCGCTGTGC GGCATCGGCC AGGCGCTCGC GCTGTTCGTG CTGCCGATCC TGCAGGCGCG TCTCGGCACC GACATGTTCT GGGTCGTCGC GATCAGTGCG GTCACGCCGA TCGTGTTTCT GCTGATCATT CGCTATGAGC CGACGGCGAA CGACGTCGAC GACGAAAGCG TGGCGTAA
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Protein sequence | MSSIDLGSVT PVSSPIRSAS DVARLINTVD SSVSHARMIV LLALGGVFLD AYDLTTLSYG IDDVAREFGL TPALTGLVGS AIMIGTIFGS LIGGWLTDRI GRYQVFMADM LFFVVAAIAA GLAPNVWVLI GARFVMGLGV GIDLPVAMAF LAEFSKFNGR GNKASRLAAW CPMWYVASSV CFLLIFGLYF LLPAEHAGWL WRASLIFGAV PALVIILFRN RFMNESPLWA ANQGDLANAA RILRESYGIH AHEADDARRE PSPPPVRIRV LFQRPYLGRT IVASVMNLCI PFEYTAIAFF LPSILSQFLG AGVFETIAAS LALNVLFAFT GGLLGMRLAY RYPSRHVAIA GFALQTVALV ALALAGHPHG ALAVGVVLLM LGTWLFAEGF GPGAQMMIYP TLSYPAAIRG TGVGFGRSLC GIGQALALFV LPILQARLGT DMFWVVAISA VTPIVFLLII RYEPTANDVD DESVA
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