Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_6717 |
Symbol | |
ID | 4454561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008544 |
Strand | + |
Start bp | 956548 |
End bp | 957696 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639698779 |
Product | porin |
Protein accession | YP_840339 |
Protein GI | 116687092 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.653963 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.435902 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAGA TGATGGCGGC CGTATCGGCC GCGAGCGCCA TGGGATTCGG CCTGACGGCC CATGCGCAAA GCACCGTGAC GCTATACGGC CTGATCGACG AAGGCGTCAA TTTCACGAGC AACGCGGGCG GCAGCAAGGC TTACCAGATG GTCAGCGGCG ATACCGTGGG CAGCAACTGG GGGCTGAAAG GCACCGAGGA CCTCGGCGGC GGGCTGAGAG CGCTGTTCCA GCTCGAGAAC GGCTTCAACG CGAGCACCGG CGCGCTCGGC GTGACGTCGC GGATGTTCGG CAGGCAGGCC TACGTCGGGC TTGATTCCGA CCGGTTCGGC ACGCTCACGT TCGGCCGCCA GTACGACCCC ACGCTCGACA TGTGGAGTCC TTTCACGGCC ACCGGCAACT GGCTCGGCGA CTTCGGCGCG CACCCGTACG ACAACGACAA CGCCGACTGG GACTACCGCA TCCAGAACAG CGTCAAGTAC GTGTCGCCCA CGTATGGCGG CTTCAAGGGC GAAGTGCTCT ACGGGCTCGC GAATCAGGCG GGCGGCTTCG CGCGAAACCG CGTTTACAGC GCCGCCGTGC AGTACCAGGC CGGCGCATTT TCCGCCGCCG TCGCGTACCT GAAGGCCAAC AACGGCGGCG CAATCGCGGG CGGCGCATTG TCGAGCGACG ACACGGTCTT CAGCGGCCGC TCGCAGCAGA ACATCGATGC CGGCGCATCG TACAAGTTCA GCGACAAGCT GACGCTGTCC GCCGCGTATT CTCACGTCGA CGTGACCAAC CCCGAGTCGA ATCTCTACTT CACGAACCAG CCCGCGGCAG GCTCGCAGAA CGCGTGGAAA TTCGACAACT TCGAGGTCAA CGGCCAGTAT TTCTTCCGGC CGGATCTCTG GCTAGGCGCC GCCTATACCT ACACGCATGC GCATGTCGCG ACGGCGGCGG GCGATGCGTC GCCGAGCTGG CACCAGCTGT CGATGATGCT CGACTACGAT CTCAGCAAGC GGACCTCGAC GTACATCCAG GGCGCGTACC AGCATGCGAC CGGCAACACC GGCACCGACT TCGACTACGC GCACGTGCTG GGCACGGCCG GGCAGTCGTC GGGCCGCAAC CAACTGGCGT TGCGCGTCGG GATGATGCAT CGTTTCTGA
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Protein sequence | MKKMMAAVSA ASAMGFGLTA HAQSTVTLYG LIDEGVNFTS NAGGSKAYQM VSGDTVGSNW GLKGTEDLGG GLRALFQLEN GFNASTGALG VTSRMFGRQA YVGLDSDRFG TLTFGRQYDP TLDMWSPFTA TGNWLGDFGA HPYDNDNADW DYRIQNSVKY VSPTYGGFKG EVLYGLANQA GGFARNRVYS AAVQYQAGAF SAAVAYLKAN NGGAIAGGAL SSDDTVFSGR SQQNIDAGAS YKFSDKLTLS AAYSHVDVTN PESNLYFTNQ PAAGSQNAWK FDNFEVNGQY FFRPDLWLGA AYTYTHAHVA TAAGDASPSW HQLSMMLDYD LSKRTSTYIQ GAYQHATGNT GTDFDYAHVL GTAGQSSGRN QLALRVGMMH RF
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