Gene Bcen2424_6700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6700 
Symbol 
ID4453958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp935409 
End bp937370 
Gene Length1962 bp 
Protein Length653 aa 
Translation table11 
GC content70% 
IMG OID639698762 
Productbeta strand repeat-containing protein 
Protein accessionYP_840322 
Protein GI116687075 
COG category[I] Lipid transport and metabolism 
COG ID[COG0671] Membrane-associated phospholipid phosphatase 
TIGRFAM ID[TIGR02601] autotransporter-associated beta strand repeat 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.162952 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGCGT CACGAAGCCG TTTCCCGCTG CACGTCGCGG CATTGTCGAG TGCGATCGTA 
CTGGCTGCCT GCGGCGGCGG CGACGACGTC ACGTCGACCG GCACGATCGC CGCGGCCGTT
CCCGCGCCGC CCGCCGACCC CGGCTTCGTC GACAGCGCGC CGATCCCGAG CGCACCCGCT
TTCGTCGACA ACGTCGCGAC CAACCAGCGC GGCGATGCGC GCTATGCGAC GCTGTCGACC
AACGCCGCGG TGCGCGTGTT GAGCCGTTTC CTCGATCTGT GGCAGCCGGC GACGATGCTG
GTCGACGCGG GCGTGAGCGC GCCGGCGAAC GGCGCGTTCC CGGCCATCTC GCCGTCGACG
TGCTCCGGAC TGCCGAACAG CGGCGTGCCG TGCGGCACGA TCCTGAACGA TGCGGTGCTG
TCGGCCAACG TGCAGTACGT GATCAACGCG ACGACCGCGC GTACGCCGCA ACAGGCCGAT
GCCGCGTACT ACGACGACCG GCGCGGCAAG GGATACAGCG TGACCGACGG CATGGGCCCG
CTCACCGCCG CGTGGCGCAC CGCGGCCCAG CAGACGACCA GCATCACCAG CGTGCCCGCC
GATGCGACGA CCGTGCTGTA CAACGATTCC GGCAACAACG TCGGCGTCGG CAGCAGCAGC
GGCAACGCCA GCTTCGGCAA GGTCGTCGAC CTGCTCAACG AAATGGGCAA CAACGCGTCG
ACCGAGCCGT CGAAGCGCTT CTTCAAATAC GCGCGCCCGT ACCGCTGGAG CACGAGTGTG
GTCGTCGCGC CGACGCTCGT GCCGGCCGAA AGCACGACGC CCGCGACCGA CGGCGGCTTC
GTCAGCGGCC ACACGGCCGA GGCTGTGCGC GATGCGACGA CGATGGCGTG GCTCGTGCCG
GAACGCTTCC AGGAAATGCT CAGCCGCGGC CTCGAACTGG GCGAGAACCG GATTCTCGCC
GGCATGCATT CGCCGCTCGA CGTGATCGGC GGGCGCATGC TCGCGCTGGC CCTCAGCGCA
GCGAACCTGA CCGCGTACGC CAGCGACGCG CAGGCCGCCT ACACGCAAGC GCATCAGACG
CTGCAGCAAC TGACCGGAAC GAGCGCCACG ACCTTCTCCG CATTCGCGCA CTCGGGCACG
ACGGCCACCG ACCGGTTCGC CGACTACACG GCGAACAAGA CCGCGTTCCT GCGCCGCATG
ACCTTCGGCT TCGGCGCGAT CGAATCGACG AACGCACCGC CGGTCGTGCC TAAGGGCGCG
GAGATCCTGC TGCAGACGCG CTTCCCGTAC CTGAGCGCCG ACCAGCGGCG CGTCGTGCTG
AAGACGACCG AGCTGCCGTC CGGCTATCCG GTCATGGACG ACGCGGAAGG CTGGGGGCGC
CTGAACCTGT TCGCGGCGGC CGACGGCTAC GGCGCGTTCA ACGGCAACGT GATCGTGTCG
ATGGATGCGT CGCAGGGCGG GCTCAATGCC GCCGACCTGT GGCGCAACGA CGTCGCGGGC
GCCGGCAAGC TGACGCTGCA AGGCAGCGGC ACGCTGACGC TGGCAGGCAA CAACGCCTAC
ACGGGCGGCA CGCAGGTGAG CGGCGGCACG CTGGCGGCCG CGTCCGCGAC GGCGTTCGGC
AAAGGCGACG TGTACGTCGG CCCGGGCGGC AGCGTGCGAA TCGCGGCCGC CGCGCCGGTG
ACGATCGCGA CCCGCTACAC GCAGCTCGAC AACACGACGC TCGAACTCGA CATCGACGGC
AACGGCGGCG GGCGGCTGCG CGTGGGCGGG CCGCTCACCG TCGCGGGCGG CACGCTGCAC
GTGAAGTTCG TGAACGGCTA CGCGCCGAAG GCCGGCGATA CCATCGCGCT GATCGACGGC
GCGGCGGCGG CCGCGAAGTT CACGACGGTG ACGGTCGACG GGTTCAAGGC CACGCCGGTG
TACACCGCGA CGGGCGTGTC GATCACGTTG TCGGCGGCAT AA
 
Protein sequence
MFASRSRFPL HVAALSSAIV LAACGGGDDV TSTGTIAAAV PAPPADPGFV DSAPIPSAPA 
FVDNVATNQR GDARYATLST NAAVRVLSRF LDLWQPATML VDAGVSAPAN GAFPAISPST
CSGLPNSGVP CGTILNDAVL SANVQYVINA TTARTPQQAD AAYYDDRRGK GYSVTDGMGP
LTAAWRTAAQ QTTSITSVPA DATTVLYNDS GNNVGVGSSS GNASFGKVVD LLNEMGNNAS
TEPSKRFFKY ARPYRWSTSV VVAPTLVPAE STTPATDGGF VSGHTAEAVR DATTMAWLVP
ERFQEMLSRG LELGENRILA GMHSPLDVIG GRMLALALSA ANLTAYASDA QAAYTQAHQT
LQQLTGTSAT TFSAFAHSGT TATDRFADYT ANKTAFLRRM TFGFGAIEST NAPPVVPKGA
EILLQTRFPY LSADQRRVVL KTTELPSGYP VMDDAEGWGR LNLFAAADGY GAFNGNVIVS
MDASQGGLNA ADLWRNDVAG AGKLTLQGSG TLTLAGNNAY TGGTQVSGGT LAAASATAFG
KGDVYVGPGG SVRIAAAAPV TIATRYTQLD NTTLELDIDG NGGGRLRVGG PLTVAGGTLH
VKFVNGYAPK AGDTIALIDG AAAAAKFTTV TVDGFKATPV YTATGVSITL SAA