Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_6700 |
Symbol | |
ID | 4453958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008544 |
Strand | + |
Start bp | 935409 |
End bp | 937370 |
Gene Length | 1962 bp |
Protein Length | 653 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639698762 |
Product | beta strand repeat-containing protein |
Protein accession | YP_840322 |
Protein GI | 116687075 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0671] Membrane-associated phospholipid phosphatase |
TIGRFAM ID | [TIGR02601] autotransporter-associated beta strand repeat |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.162952 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGCGT CACGAAGCCG TTTCCCGCTG CACGTCGCGG CATTGTCGAG TGCGATCGTA CTGGCTGCCT GCGGCGGCGG CGACGACGTC ACGTCGACCG GCACGATCGC CGCGGCCGTT CCCGCGCCGC CCGCCGACCC CGGCTTCGTC GACAGCGCGC CGATCCCGAG CGCACCCGCT TTCGTCGACA ACGTCGCGAC CAACCAGCGC GGCGATGCGC GCTATGCGAC GCTGTCGACC AACGCCGCGG TGCGCGTGTT GAGCCGTTTC CTCGATCTGT GGCAGCCGGC GACGATGCTG GTCGACGCGG GCGTGAGCGC GCCGGCGAAC GGCGCGTTCC CGGCCATCTC GCCGTCGACG TGCTCCGGAC TGCCGAACAG CGGCGTGCCG TGCGGCACGA TCCTGAACGA TGCGGTGCTG TCGGCCAACG TGCAGTACGT GATCAACGCG ACGACCGCGC GTACGCCGCA ACAGGCCGAT GCCGCGTACT ACGACGACCG GCGCGGCAAG GGATACAGCG TGACCGACGG CATGGGCCCG CTCACCGCCG CGTGGCGCAC CGCGGCCCAG CAGACGACCA GCATCACCAG CGTGCCCGCC GATGCGACGA CCGTGCTGTA CAACGATTCC GGCAACAACG TCGGCGTCGG CAGCAGCAGC GGCAACGCCA GCTTCGGCAA GGTCGTCGAC CTGCTCAACG AAATGGGCAA CAACGCGTCG ACCGAGCCGT CGAAGCGCTT CTTCAAATAC GCGCGCCCGT ACCGCTGGAG CACGAGTGTG GTCGTCGCGC CGACGCTCGT GCCGGCCGAA AGCACGACGC CCGCGACCGA CGGCGGCTTC GTCAGCGGCC ACACGGCCGA GGCTGTGCGC GATGCGACGA CGATGGCGTG GCTCGTGCCG GAACGCTTCC AGGAAATGCT CAGCCGCGGC CTCGAACTGG GCGAGAACCG GATTCTCGCC GGCATGCATT CGCCGCTCGA CGTGATCGGC GGGCGCATGC TCGCGCTGGC CCTCAGCGCA GCGAACCTGA CCGCGTACGC CAGCGACGCG CAGGCCGCCT ACACGCAAGC GCATCAGACG CTGCAGCAAC TGACCGGAAC GAGCGCCACG ACCTTCTCCG CATTCGCGCA CTCGGGCACG ACGGCCACCG ACCGGTTCGC CGACTACACG GCGAACAAGA CCGCGTTCCT GCGCCGCATG ACCTTCGGCT TCGGCGCGAT CGAATCGACG AACGCACCGC CGGTCGTGCC TAAGGGCGCG GAGATCCTGC TGCAGACGCG CTTCCCGTAC CTGAGCGCCG ACCAGCGGCG CGTCGTGCTG AAGACGACCG AGCTGCCGTC CGGCTATCCG GTCATGGACG ACGCGGAAGG CTGGGGGCGC CTGAACCTGT TCGCGGCGGC CGACGGCTAC GGCGCGTTCA ACGGCAACGT GATCGTGTCG ATGGATGCGT CGCAGGGCGG GCTCAATGCC GCCGACCTGT GGCGCAACGA CGTCGCGGGC GCCGGCAAGC TGACGCTGCA AGGCAGCGGC ACGCTGACGC TGGCAGGCAA CAACGCCTAC ACGGGCGGCA CGCAGGTGAG CGGCGGCACG CTGGCGGCCG CGTCCGCGAC GGCGTTCGGC AAAGGCGACG TGTACGTCGG CCCGGGCGGC AGCGTGCGAA TCGCGGCCGC CGCGCCGGTG ACGATCGCGA CCCGCTACAC GCAGCTCGAC AACACGACGC TCGAACTCGA CATCGACGGC AACGGCGGCG GGCGGCTGCG CGTGGGCGGG CCGCTCACCG TCGCGGGCGG CACGCTGCAC GTGAAGTTCG TGAACGGCTA CGCGCCGAAG GCCGGCGATA CCATCGCGCT GATCGACGGC GCGGCGGCGG CCGCGAAGTT CACGACGGTG ACGGTCGACG GGTTCAAGGC CACGCCGGTG TACACCGCGA CGGGCGTGTC GATCACGTTG TCGGCGGCAT AA
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Protein sequence | MFASRSRFPL HVAALSSAIV LAACGGGDDV TSTGTIAAAV PAPPADPGFV DSAPIPSAPA FVDNVATNQR GDARYATLST NAAVRVLSRF LDLWQPATML VDAGVSAPAN GAFPAISPST CSGLPNSGVP CGTILNDAVL SANVQYVINA TTARTPQQAD AAYYDDRRGK GYSVTDGMGP LTAAWRTAAQ QTTSITSVPA DATTVLYNDS GNNVGVGSSS GNASFGKVVD LLNEMGNNAS TEPSKRFFKY ARPYRWSTSV VVAPTLVPAE STTPATDGGF VSGHTAEAVR DATTMAWLVP ERFQEMLSRG LELGENRILA GMHSPLDVIG GRMLALALSA ANLTAYASDA QAAYTQAHQT LQQLTGTSAT TFSAFAHSGT TATDRFADYT ANKTAFLRRM TFGFGAIEST NAPPVVPKGA EILLQTRFPY LSADQRRVVL KTTELPSGYP VMDDAEGWGR LNLFAAADGY GAFNGNVIVS MDASQGGLNA ADLWRNDVAG AGKLTLQGSG TLTLAGNNAY TGGTQVSGGT LAAASATAFG KGDVYVGPGG SVRIAAAAPV TIATRYTQLD NTTLELDIDG NGGGRLRVGG PLTVAGGTLH VKFVNGYAPK AGDTIALIDG AAAAAKFTTV TVDGFKATPV YTATGVSITL SAA
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