Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_6630 |
Symbol | |
ID | 4454540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008544 |
Strand | + |
Start bp | 860277 |
End bp | 861239 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639698692 |
Product | LysR family transcriptional regulator |
Protein accession | YP_840252 |
Protein GI | 116687005 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.466638 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATATTC GTCAGGTCGA TCTGAATCTG CTGAAAGTGT TCGATGCGCT GCTGAAAAAG CGCCATGTGA CGCAGGCGGG CGTCAGCATC GGGCTCAGCC AGCCGGCGAT GAGCTATGCG TTGTCGAAGC TGCGCGAGCT GTTCGAGGAC CCGCTGTTCG TGCGCACGGG CCGCGGCATG GAGCCGACGC CGCGCGCGCA GGCGCTCGGC GAGCCGGTCG CGCGGCTACT GGATCTGGTG CAGACCGAAA TCCTGCCGAT GCCCGAGTTT CGCCCGGCCG AGTCGTCGCG CAACTTCGTG CTGTGCATGT CGGACATCGG CGAAATGGTG TTCCTGCCCC GCCTGGAGAG CTTTCTCGAC AAGGCCGCGC CGCACGTGAG CATCAAGACG GTCGCGCTCA GCATGCCGGA GCTGGAGGAG GGGCTGGCGA GCGGCGACGT CGACCTCGCG ATCGGCTACT TTCCGGGGTT GAACAGCGAA TCGCTGAAGC GCAAGGCGCT GTACCGGCAT TCGTATGTGT GTATCGCCCG CGACGATCAT CCGGAAATCG GGGACACGCT GTCGCTCGAT CAGTACCGCG CCGCCGCGCA TGTGATGGTG CATCCCGAAG GCCGCGAGCA GGACGTGCTC GCCCGCACGC ACGAGCGCCT CGGGATTCGC GTCAACGTCC GCTTCAGTAC GCCGCGCTTC ATCGGCGTGC CGTTCGTCGT CGCCGGGTCG GACATGATCG CGGCGGTGCC GCAGGCCGTC GGGCGGCGCT TCGCGGAGTT CGTGAACGTC AAGCTGCTGC CGCTGCCCTT CCCCGCCCCC ACGTACGAGC TTTATCTGCA CTGGCATCCG CGCTTTCATC ACGAGCCGGC CAACCGCTGG ATTCGCGACG CGATGAGCGA ACTCGTCAAG GGGCCGATGC AGCACGAGCC GTTGCCGAAT ACGAAGCGGA AGCGTTCGGC GGCGGCGCGG TAG
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Protein sequence | MDIRQVDLNL LKVFDALLKK RHVTQAGVSI GLSQPAMSYA LSKLRELFED PLFVRTGRGM EPTPRAQALG EPVARLLDLV QTEILPMPEF RPAESSRNFV LCMSDIGEMV FLPRLESFLD KAAPHVSIKT VALSMPELEE GLASGDVDLA IGYFPGLNSE SLKRKALYRH SYVCIARDDH PEIGDTLSLD QYRAAAHVMV HPEGREQDVL ARTHERLGIR VNVRFSTPRF IGVPFVVAGS DMIAAVPQAV GRRFAEFVNV KLLPLPFPAP TYELYLHWHP RFHHEPANRW IRDAMSELVK GPMQHEPLPN TKRKRSAAAR
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