Gene Bcen2424_6461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6461 
Symbol 
ID4454487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp678581 
End bp679438 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content69% 
IMG OID639698524 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_840084 
Protein GI116686837 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCG CACAGACTCC CCCGCCGCAG AAACAGACGC AGCAGCCGGG CACGGAGCGC 
GACATGCATC CGAAGCCGCG CGACGAGGCG GCCGACTACG TCGGCAGCGG CAAGCTCGCC
GGCAAGGTCG CGCTGGTGAC GGGCGGCGAC AGCGGGATCG GCCGCGCCGT GGCGGTCGGT
TTCGCGAAGG AGGGCGCGGA CGTCGCGATC GTCTACCTGA AGGAATCCGA CGACGCCGCG
CACACGAAGC AACTGATCGA GCAGGCCGGC CGACGCTGCG AGGCGATCGC GTGCGACGTC
GGCGATCGCC GGCAGGCGCG CGATGCGGTC GCCCGCACGG TCGAGCGGCT CGGCCGGCTC
GACGTGCTCG TGAACAATGC GGGCGAGCAG CATCCGCAGC CGGGCATCGA GGACGTGTCC
GAGGAACAGC TCGAGCGCAC GTTCCGCACC AACGTATACG GGATGTTCTT CTGCACGCAG
GCCGCGCTGC CCCACCTGAA GGAAGGCGGC CGCATCGTCA ACACGGCGTC GGTCACTGCT
TATCACGGCA GCCCGAAACT GCCCGACTAT TCGGCGACCA AGGGCGCGAT CGTCGCGTTC
ACGCGCTCGC TGTCGATCGA GCTGGCCGAA CGCGACATCC GCGTGAACGC GGTCGCGCCG
GGGCCGATCT GGACGCCGCT GATTCCGTCG ACGTTCACGC CCGAGCAGGT CGCGAAATTC
GGCTCGAACG TGCCGCTCAA GCGGCCGGGC CAGCCGGACG AACTGATCGA CTGCTACGTG
CTGCTCGCGT CGGACGGCGC GAGCTACATG ACCGGGCAGA CGCTGCATCC GAACGGCGGC
TCGATCGTCG GCGGCTGA
 
Protein sequence
MTTAQTPPPQ KQTQQPGTER DMHPKPRDEA ADYVGSGKLA GKVALVTGGD SGIGRAVAVG 
FAKEGADVAI VYLKESDDAA HTKQLIEQAG RRCEAIACDV GDRRQARDAV ARTVERLGRL
DVLVNNAGEQ HPQPGIEDVS EEQLERTFRT NVYGMFFCTQ AALPHLKEGG RIVNTASVTA
YHGSPKLPDY SATKGAIVAF TRSLSIELAE RDIRVNAVAP GPIWTPLIPS TFTPEQVAKF
GSNVPLKRPG QPDELIDCYV LLASDGASYM TGQTLHPNGG SIVGG