Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_6430 |
Symbol | |
ID | 4454146 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008544 |
Strand | + |
Start bp | 644427 |
End bp | 645851 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639698493 |
Product | GntR family transcriptional regulator |
Protein accession | YP_840053 |
Protein GI | 116686806 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTCT ACGAGAAATT TGCGAACGAC GTAGAGCGAC TCATTCGGCA AGGCGTATAT CGACACGGCG ACCGTGTGCC GTCGGTGCGG CAGGCGAGCC AGCAGCACCG GATCAGCATC ACGACCGTGC TGCATGCGTA TCTGCTGCTG GAAAGCCGCG GGCTGCTCGA AAGCCGGCCG CAGTCGGGCT ATTTCGTGAA CCTGCGGCGC GACGACGGCC ACGCGCCGGT GCGCGAGCTG CGGCCGTCGA AGCCGATCGC GATCTCGTCG TCGGTGGACG TGAGCCGGCT CGTGCTGTCG ACGCTGCGCT CGATCGGCAC GGACGACGCG GTGCCGCTCG GCTCGCCGTA CCCGGACCCG AGCCTGTTTC CGTTCGAGAA GCTGAACCGC TACGCGTATG CGGCTGGCCG CGACAAGTCG CTGTGGGGCG TGACGGACGG GCTGCCGCCG GGCCATCCGC GGCTGATCCG GCAGATCGCG CGGCGCTACC TGGAAAACGG GATGTCGGTG GACCCGAACG AGATCATCGT GACGGTCGGC GCAACGGAGG CGATCAACCT GTGCCTGCAG GCGGTGGCGA AGCCGGGCGA CACGATCGCG GTGGAGTCGC CGACGTTCTA CGCGATGCTG CACGCGATCG AGCGGATGGG GATGAAGGCG ATCGAGGTGG CCACACACCC GGAATATGGA ATCGACATCG CGGCGCTGGC CGCGATCGCG AAATCGCAGC CGATCGCCGC GTGCATGGTG ATGCCGAACT TCCAGAATCC GCTGGGCTTC CAGATGCCGG ACGAGCGCAA GCGCGAACTG GTGGCGTTCG CAACGAAAGC CGACCTGCCG ATCATCGAGA ACGGCGTGTA CAACGAACTG TATTTCGGCA ACATGCATCC GAGCACGCTG AAGTCGTTCG ATCGCCATGA CATCGTGCTG CATTGCGCGT CGTTCTCTAA GAGCCTGACG GCCGCGTACC GGATCGGCTG GGCGCTGCCG GGCCGCTACC GCGAGCAGGT CGAGAAGCTG AAGTTCCTGA ATACGCTGGC GACGCCGTCG TTGCCGCAGC TCGCGATCGC GGAGTTTCTC GAACGCGACG GCTACGAACA TCACCTGCGG CGGGTTCGCA AGGCGTATGC GCAGCAGGCG AACCTGATGC GCGCGATGGT GTCGCGGTTC TTTCCGGAAG GCACGCGCAT TTCGAGCCCG GCAGGCGGGT ACGTGCTGTG GGTCGAGCTG CCCGCGCAGG TCGATGCGAT GCGGCTGTAC CAGCTCGCGC TGGAGCAGGG GATCACGATC GGGCCCGGCT ACATGTTTTC GATCGCGGAT ACTTACCGGA ACTTCATCCG GTTGAACTAC AGCAGCCCGT GGTCGCCCGA GATCGAGCGC GCGGTCGTCA CCGTCGGCAA GCTCGCCGCA TCCTGCATCG ACTGA
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Protein sequence | MKLYEKFAND VERLIRQGVY RHGDRVPSVR QASQQHRISI TTVLHAYLLL ESRGLLESRP QSGYFVNLRR DDGHAPVREL RPSKPIAISS SVDVSRLVLS TLRSIGTDDA VPLGSPYPDP SLFPFEKLNR YAYAAGRDKS LWGVTDGLPP GHPRLIRQIA RRYLENGMSV DPNEIIVTVG ATEAINLCLQ AVAKPGDTIA VESPTFYAML HAIERMGMKA IEVATHPEYG IDIAALAAIA KSQPIAACMV MPNFQNPLGF QMPDERKREL VAFATKADLP IIENGVYNEL YFGNMHPSTL KSFDRHDIVL HCASFSKSLT AAYRIGWALP GRYREQVEKL KFLNTLATPS LPQLAIAEFL ERDGYEHHLR RVRKAYAQQA NLMRAMVSRF FPEGTRISSP AGGYVLWVEL PAQVDAMRLY QLALEQGITI GPGYMFSIAD TYRNFIRLNY SSPWSPEIER AVVTVGKLAA SCID
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