| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6313 |
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| Symbol | |
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| ID | 4454081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008544 |
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| Strand | + |
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| Start bp | 498837 |
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| End bp | 499967 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639698378 |
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| Product | porin |
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| Protein accession | YP_839938 |
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| Protein GI | 116686691 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.597714 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGAA AAGTCATCTC GGCGATCTCT CTGTCGATTA CCGCCTACGC GGCCGGCGCG
CATGCGCAAA GCTCGGTCAC GCTTTACGGC ATCGTCGATA CCGGTATCGC ATACATTCAC
AACAGCGGCG GACAAGCGTC GCAATGGAAG ATGTCGGCCG GTAATCTGTC CGGAAACGAA
TGGGGGCTCA AGGGCACCGA AGATCTCGGC GGAGGCTTGT CGGCGAGCTT CCAGCTCGAG
AACGGCTTCG ATCTCGGCTC GGGTCAGTTG CAGAACGACG GCCGCATGTT CGGCCGGCAA
GCGTTCGTCG GGCTGGGCAG CACGCGTTTC GGGACGGTCA CGCTCGGGCG GCAATACGAT
CCGGTGACCG ATCTGGTTCA GCCGATCACC GCCGATTCGT ACAGCGGCCT GTTCGCGCCG
CCGGGCGATA TCGACAATTA CGACGACAGC GCGCGTTTCA ATAGTGCGGT CAAGTGGACG
AGCCCGTCGT GGGGCGGTGT CACGGTCGAG ACCATGTATG CGTTCGGCGG CGTGGCAGGA
TCGACGGGCT CCGGGCAAAG CTGGTCGGCC GCGGCGGCCT ACAGCGGCGG CGCGCTCAGC
GTGGCGGGCG GGTTCCTGCA CGTGGACAAC GGCAACGCCA GGACGTCGGC ACGCGGCACG
TCGAGCGCGG ACAGTTTCTT CAACAGCGCC GTCAATGCGG CGTATGCCAC TGCCCGCGGC
ATCGATATCG GGCGGATCGG CGCACAGTAC GTCGTCGGGC CGGTCACGGC CGGCGCGGCG
TACTCGTACA CGCGCTATAC GTCGGACGGC GCGTCGACGT TCGCGGGTTC GCAGCACTTC
CAGAACGGCT CCGTGTTCGC GAGCTGGATG GCGACGCCGA CGCTCCAGGT GATCGGCGGC
TACAACTACA CGCGTTCGGG CGGCCATTCG TCGGCGACCT ATCAGCAGGT CAATCTCGGC
GTCGACTATT TGCTGAGCAA ACGGACCGAC GTCTATGCGA TGGCCGGCTA TCAGCATGCG
AGCGGCGACA ATGGCCAGGG GAGCGCTCAA GCGGTGATCG GCTCTTACGA CGTCAATTCG
GGCGCGAATT CGCAGATCGT CGCAATCGTC GGCCTGCGCC ACAAGTTCTG A
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| Protein sequence | MKRKVISAIS LSITAYAAGA HAQSSVTLYG IVDTGIAYIH NSGGQASQWK MSAGNLSGNE
WGLKGTEDLG GGLSASFQLE NGFDLGSGQL QNDGRMFGRQ AFVGLGSTRF GTVTLGRQYD
PVTDLVQPIT ADSYSGLFAP PGDIDNYDDS ARFNSAVKWT SPSWGGVTVE TMYAFGGVAG
STGSGQSWSA AAAYSGGALS VAGGFLHVDN GNARTSARGT SSADSFFNSA VNAAYATARG
IDIGRIGAQY VVGPVTAGAA YSYTRYTSDG ASTFAGSQHF QNGSVFASWM ATPTLQVIGG
YNYTRSGGHS SATYQQVNLG VDYLLSKRTD VYAMAGYQHA SGDNGQGSAQ AVIGSYDVNS
GANSQIVAIV GLRHKF
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