Gene Bcen2424_6300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6300 
Symbol 
ID4454464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp481914 
End bp483335 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content57% 
IMG OID639698365 
Productamino acid permease-associated region 
Protein accessionYP_839925 
Protein GI116686678 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.819384 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACTC ATATTTCGCG CGGATCTGGA AGTCAGGCCG CTATTTCGTC AGCAGGGTTC 
GCCGGTGCGA ATCCGTCTGA ACAAACTGCC GGAATAAGCG AATCGTCCTT GAAATTGAGC
CGCGAATTGA GTGTGCTCGA TTTGATCGTG TACGGCATGG TTTACATGCT TCCGATCGCG
CCGTTCGCAC TTTACGGAAT CATTTCCAAT GTCAGCGGCG GTATGGTGCC GCTGGTATAC
ATCGTGAGTG TCGTCGCGAT GATGTTTACG GCCCGGAGTT ACCAGATACT CAGCAAGGAA
TTTCCGGCAG CCGGGTCAGC CTATACCTAT GCTCAAAACG GCATCGGCGA TCTGGCCGGT
TTTCTGGCCG GATGGCTGGT GTTTCTCGAC TACATCATCG CGCCGGGACT GCTCGCGGTC
GTCAGCGCGG TTGCGATGAA CAGCCTGGTG CCCGAGATTC CCCGTTCCGT CTGGGTGATC
GGATTCGTCG GCCTCGGAAC GATCCTGAAT CTGGTCGGTA TCTCGGTGAC CGCGAAAGTG
AACCAGGCGT TCCTCGTGAT CATGCTGGTC ATTCTGGCCG CGTTCGTCGG AGTCGGTCTC
TTTGCGCTTT ACAGCGGCAT GGGGCACGGC CGGCTCACGT TCGGTTCGCT CTTCAATGTC
CATACTTTCA CATGGGCGGG GCTCGGCACC GGCATCCTCA TCGGTTCGAC GAACTTTCTC
GGCTTCGACG CGATCACGAC GCTCGGAGAA GAAGTCAGGA GCGAGAAGCG TCATCTGGCC
AGCTTTGCCG GCATGGCATC GCTGGTCATC ATCGCGATCC TGTTCGTGCT GCAGACCTGG
ATTGCTGCCG ACCTCGCGTC TGGCGCGAAG GTACTGTCGC CGGATAGCGC CTTTTACGAC
ATATCGGGTT ACGCGGGCGG CCACTGGCTG TTCGCGATGA CGTCCATCAG CACTGCACTG
GCATTCGGCG TGCCGTGCAC GATCGTCTGC CAGATGGCAA TCGCCCGCAT CATCTTCGCG
ATGGGGCGCG ACCGGCAGCT TCCCAAGGTG TTTTCCCGTC TGTCGCGCAG ATCGAAGCAA
CCGTATGTGG CGAATATTTT CGTTGCATCC ATCTCGCTGA TCATCGCATT GGTCTTTCAG
GATCGGCTCG ACGACCTGGC CTTGTTCCAG AACTTCGGCG CATTCTCTGC ATTCATCCTG
GTCAACCTTT CCGTCATCGG TTACTTCAGG ATCAAGAAGC AGTCGAAGGA CACATGGAAT
CACGTGGTTC TGCCGGCGAT CGGATTTCTC GTCATCGTTG CACTCATGGT CGCGATGAGG
GCCGCAACGT TGAAGATGGG CATCATCTGG CTCGTGATCG GGCTCGTCTA TTACTTTGTG
ATGCGCCATG TGTTTGGACG CAGTGCGGCA CTGAAGATCT GA
 
Protein sequence
MDTHISRGSG SQAAISSAGF AGANPSEQTA GISESSLKLS RELSVLDLIV YGMVYMLPIA 
PFALYGIISN VSGGMVPLVY IVSVVAMMFT ARSYQILSKE FPAAGSAYTY AQNGIGDLAG
FLAGWLVFLD YIIAPGLLAV VSAVAMNSLV PEIPRSVWVI GFVGLGTILN LVGISVTAKV
NQAFLVIMLV ILAAFVGVGL FALYSGMGHG RLTFGSLFNV HTFTWAGLGT GILIGSTNFL
GFDAITTLGE EVRSEKRHLA SFAGMASLVI IAILFVLQTW IAADLASGAK VLSPDSAFYD
ISGYAGGHWL FAMTSISTAL AFGVPCTIVC QMAIARIIFA MGRDRQLPKV FSRLSRRSKQ
PYVANIFVAS ISLIIALVFQ DRLDDLALFQ NFGAFSAFIL VNLSVIGYFR IKKQSKDTWN
HVVLPAIGFL VIVALMVAMR AATLKMGIIW LVIGLVYYFV MRHVFGRSAA LKI