Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_6300 |
Symbol | |
ID | 4454464 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008544 |
Strand | + |
Start bp | 481914 |
End bp | 483335 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639698365 |
Product | amino acid permease-associated region |
Protein accession | YP_839925 |
Protein GI | 116686678 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.819384 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATACTC ATATTTCGCG CGGATCTGGA AGTCAGGCCG CTATTTCGTC AGCAGGGTTC GCCGGTGCGA ATCCGTCTGA ACAAACTGCC GGAATAAGCG AATCGTCCTT GAAATTGAGC CGCGAATTGA GTGTGCTCGA TTTGATCGTG TACGGCATGG TTTACATGCT TCCGATCGCG CCGTTCGCAC TTTACGGAAT CATTTCCAAT GTCAGCGGCG GTATGGTGCC GCTGGTATAC ATCGTGAGTG TCGTCGCGAT GATGTTTACG GCCCGGAGTT ACCAGATACT CAGCAAGGAA TTTCCGGCAG CCGGGTCAGC CTATACCTAT GCTCAAAACG GCATCGGCGA TCTGGCCGGT TTTCTGGCCG GATGGCTGGT GTTTCTCGAC TACATCATCG CGCCGGGACT GCTCGCGGTC GTCAGCGCGG TTGCGATGAA CAGCCTGGTG CCCGAGATTC CCCGTTCCGT CTGGGTGATC GGATTCGTCG GCCTCGGAAC GATCCTGAAT CTGGTCGGTA TCTCGGTGAC CGCGAAAGTG AACCAGGCGT TCCTCGTGAT CATGCTGGTC ATTCTGGCCG CGTTCGTCGG AGTCGGTCTC TTTGCGCTTT ACAGCGGCAT GGGGCACGGC CGGCTCACGT TCGGTTCGCT CTTCAATGTC CATACTTTCA CATGGGCGGG GCTCGGCACC GGCATCCTCA TCGGTTCGAC GAACTTTCTC GGCTTCGACG CGATCACGAC GCTCGGAGAA GAAGTCAGGA GCGAGAAGCG TCATCTGGCC AGCTTTGCCG GCATGGCATC GCTGGTCATC ATCGCGATCC TGTTCGTGCT GCAGACCTGG ATTGCTGCCG ACCTCGCGTC TGGCGCGAAG GTACTGTCGC CGGATAGCGC CTTTTACGAC ATATCGGGTT ACGCGGGCGG CCACTGGCTG TTCGCGATGA CGTCCATCAG CACTGCACTG GCATTCGGCG TGCCGTGCAC GATCGTCTGC CAGATGGCAA TCGCCCGCAT CATCTTCGCG ATGGGGCGCG ACCGGCAGCT TCCCAAGGTG TTTTCCCGTC TGTCGCGCAG ATCGAAGCAA CCGTATGTGG CGAATATTTT CGTTGCATCC ATCTCGCTGA TCATCGCATT GGTCTTTCAG GATCGGCTCG ACGACCTGGC CTTGTTCCAG AACTTCGGCG CATTCTCTGC ATTCATCCTG GTCAACCTTT CCGTCATCGG TTACTTCAGG ATCAAGAAGC AGTCGAAGGA CACATGGAAT CACGTGGTTC TGCCGGCGAT CGGATTTCTC GTCATCGTTG CACTCATGGT CGCGATGAGG GCCGCAACGT TGAAGATGGG CATCATCTGG CTCGTGATCG GGCTCGTCTA TTACTTTGTG ATGCGCCATG TGTTTGGACG CAGTGCGGCA CTGAAGATCT GA
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Protein sequence | MDTHISRGSG SQAAISSAGF AGANPSEQTA GISESSLKLS RELSVLDLIV YGMVYMLPIA PFALYGIISN VSGGMVPLVY IVSVVAMMFT ARSYQILSKE FPAAGSAYTY AQNGIGDLAG FLAGWLVFLD YIIAPGLLAV VSAVAMNSLV PEIPRSVWVI GFVGLGTILN LVGISVTAKV NQAFLVIMLV ILAAFVGVGL FALYSGMGHG RLTFGSLFNV HTFTWAGLGT GILIGSTNFL GFDAITTLGE EVRSEKRHLA SFAGMASLVI IAILFVLQTW IAADLASGAK VLSPDSAFYD ISGYAGGHWL FAMTSISTAL AFGVPCTIVC QMAIARIIFA MGRDRQLPKV FSRLSRRSKQ PYVANIFVAS ISLIIALVFQ DRLDDLALFQ NFGAFSAFIL VNLSVIGYFR IKKQSKDTWN HVVLPAIGFL VIVALMVAMR AATLKMGIIW LVIGLVYYFV MRHVFGRSAA LKI
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