| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6206 |
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| Symbol | |
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| ID | 4454161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008544 |
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| Strand | + |
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| Start bp | 372985 |
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| End bp | 374511 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639698266 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_839831 |
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| Protein GI | 116686584 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00238233 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCAAAAAC ATGCTTTGAC TGCAACCGCG GTCGCACTGG CTGCCGCGCT GTTTGCCACG
GGATGCACGA TGGCGCCGCA CTACAAGCGG CCCGACGCAC CCGTCGCGCA GGCGTATCCG
GCGGGCGGCG TCTACGCGAC GCAGCCGGGT GCGGCCGGCG CGCACAGCGC GAACGGCCAG
GCGGCGACTG CCATCGGCTG GCGCGAGTTC TTCGTCGATC CGCGCCTGCA GCGGCTGATC
GAGATCGCGC TGAAAAACAA CCGCGACCTG CGTGTATCGG TGCTCAATAT CGAGGCGGCG
CGTGCGCAGT ACCAGATCAC GCGCGCGGGG CTGTTCCCGA CGCTCGACGG TACGGGCACG
GGCAACATCC AGCGTCTGCC GGCCGGTGTG TCGACGACGA GGGCGCCGCT GATTTCGCGC
ACCTATAACG TTGGATTGTC CGCGTCGTGG GAGCTCGACC TGTTCGGCCG CGTGCAGAGC
CTGAAGGATC AGGCGCTCGC GCAATACCTG TCGACCGCGT ATGCGCGGCA GGCGTCGGAG
ATCTCGCTGG TGTCGCAGGT GGCCGATCAA TACCTGACGC TGCTGTCGAC CGATGACCTG
CTGAAGGTCA CGGAGGACAC GCTGAAGACC GCGCAGGCGT CTTACGACCT GACCAAGCTG
CAGTTCGACA ACGGTACGGG CTCGGAGCTC GAGCTGCGTC AGGCGCAGAC GGTGGTCGAG
ACGGCGCTCG CGAACCAGCA GGCGCAGGCG CGTGCCCGCG CGCAGGCGCT GAACGCGCTG
GTGCTGCTGA TCGGCGAGCC GCTGCCGGAC GACCTGCCGG CGGGCATGCC GCTTGACGCG
CAGAACCTGC TGACGGACGT GCCGGCCGGG TTGCCGTCGG ATCTGCTGAC GCGTCGTCCT
GACGTGATGC AGGCCGAGCA GACACTGCTG GCCGCGAACG CGAACATCGG CGCGGCGCGC
GCGGCGTTCT TCCCGCGTAT CTCGCTGACA GCCGCGTTCG GTACCGCGAG CCCGACGCTG
GGCGGCCTGT TCAAGGCCGG CACGGCGGCG TGGTCGTTCG CGCCGAACAT CGCGCTGCCG
ATCTTCGAGG GCGGCCAGAA CATCGCGAAC CTCGATCTCG CGAACGTGCA GAAGCGTATC
GAAATCGCGA ACTACGAGAA GGCGATCCAG TCGGCATTCC GCGAAGTGTC GGATGGCCTC
GCCGCACGCG GCACGTACGA CCAGCAGATC GCGGCGCTCG AGCGCAACGA GCACGCGCAG
CAACGTCGCT TCGACCTGTC GGACCTGCGT TACAAGAACG GTGTCGACAG CTACCTGTCG
GTGCTGACTG CGCAGACGGA TCTGTACTCG GCGCAGCAGT CGCTGATCAG TGCACGCCTG
GCGCGCTGGA CGAACCTGGT CGACCTGTAC CGCGCGCTAG GCGGCGGCTG GATTCAGCGT
GCAGGCGAAG CGCCACGCGC GCCGGATACA CCGGGCGACT ACAGCAAGGC GGCGGCTCCT
GCGCCCGCGT CGGCTGTGAA CGGGTAA
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| Protein sequence | MQKHALTATA VALAAALFAT GCTMAPHYKR PDAPVAQAYP AGGVYATQPG AAGAHSANGQ
AATAIGWREF FVDPRLQRLI EIALKNNRDL RVSVLNIEAA RAQYQITRAG LFPTLDGTGT
GNIQRLPAGV STTRAPLISR TYNVGLSASW ELDLFGRVQS LKDQALAQYL STAYARQASE
ISLVSQVADQ YLTLLSTDDL LKVTEDTLKT AQASYDLTKL QFDNGTGSEL ELRQAQTVVE
TALANQQAQA RARAQALNAL VLLIGEPLPD DLPAGMPLDA QNLLTDVPAG LPSDLLTRRP
DVMQAEQTLL AANANIGAAR AAFFPRISLT AAFGTASPTL GGLFKAGTAA WSFAPNIALP
IFEGGQNIAN LDLANVQKRI EIANYEKAIQ SAFREVSDGL AARGTYDQQI AALERNEHAQ
QRRFDLSDLR YKNGVDSYLS VLTAQTDLYS AQQSLISARL ARWTNLVDLY RALGGGWIQR
AGEAPRAPDT PGDYSKAAAP APASAVNG
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