| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6129 |
|---|
| Symbol | |
|---|
| ID | 4454457 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008544 |
|---|
| Strand | - |
|---|
| Start bp | 286763 |
|---|
| End bp | 287680 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639698189 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_839754 |
|---|
| Protein GI | 116686507 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.414294 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATCA ACGACCTGAG GATCTTCGTC GCGACCGTGG ACGCCGGCAG CTTCACGGCG
GCGGCCGATC AGCTGATGCT GTCCAAGCAG TTCGTCAGCC GGCGCACGAT GGCGCTGGAG
GCGTCGCTCG GTGTCCGGCT GCTGCACCGG AATACCCGCA ATCTGGCGGT GACCGAATCG
GGGCAGGAGT TCTACGTGCG CGCGCAGCGC ATCCTCGCGG AGATCGCCGA CGCCGAGCAG
GCGATGTCGG TACGCAGCAC CGAGCTGCAT GGCTCGCTGA AGATCAGCGC GCCGCTGTCG
TTCGGGATCA CGCACGTGTC GCCGCTGATC GCCGAATTCC TGTCCGCGCA CCCGGCCGTG
CGGCTGAACC TCGACCTGAC CGACCGGCGC GTCGACCTGA TCGGCGAGGG CTTCGACCTC
GTGCTGCGGA TCGGCTCGCT CGAGGATTCC ACGTTGATCG CGCGTCCGCT CGGCGCGTGG
CGGATGATCG CGTGCGCGAG CCCCGCCTAC CTGAAGCGGC ACGGCACGCC GCAGACGCCG
GCCGATCTCG CCGGCCACAC CTGTGTGCTG TACGGGCGCG AGCGGCGGGT CGGCTGGGAA
TTCCGCGTCG ACGGTGCGGT GCGCACGTTC GACGTGCAGG GGCCGCTCGT CGCGAACAAC
GGCGAAGTGG TGCGCGACGC GGCGATCGCG GGGCTCGGCA TCGCGCTGCT GCCGCACTTC
ATCGTCGGCG CGGCGCTCGA CAGCGGCGCG CTCGTGCCGG TGCTCGACGC GTACGTGCCG
CCGCCGATCA CGCTCAATGC GGTGTTTCCG CAGCACCGGG AAGGGTTCGT CACGTTGCGC
ACGTTCATCG GGTTTCTCGC GGAGCGGCTC GGGGAACCGG CGCCCACGGG TGTGAATGGG
GCGGGCCGGG TACGGTAG
|
|---|
| Protein sequence | MEINDLRIFV ATVDAGSFTA AADQLMLSKQ FVSRRTMALE ASLGVRLLHR NTRNLAVTES
GQEFYVRAQR ILAEIADAEQ AMSVRSTELH GSLKISAPLS FGITHVSPLI AEFLSAHPAV
RLNLDLTDRR VDLIGEGFDL VLRIGSLEDS TLIARPLGAW RMIACASPAY LKRHGTPQTP
ADLAGHTCVL YGRERRVGWE FRVDGAVRTF DVQGPLVANN GEVVRDAAIA GLGIALLPHF
IVGAALDSGA LVPVLDAYVP PPITLNAVFP QHREGFVTLR TFIGFLAERL GEPAPTGVNG
AGRVR
|
|---|
| |