Gene Bcen2424_6020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6020 
Symbol 
ID4454766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp168402 
End bp169415 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content72% 
IMG OID639698080 
ProductABC transporter related 
Protein accessionYP_839645 
Protein GI116686398 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.628016 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTTT CGTTTCTGGC GTCCGTGCGC GCGATGTTCG CCCCGCGCGC CGCGTTCGAC 
CGGCCGCGGC GCGCGGGCAC GCCGCCGCTG CCCGACGCGC ATGCGCCGGG CGCGGCGCTC
GGCGCGCGGG CGATCGACGT CGCGGCCGGC GATTTCCGCT TCTCCGCGCG CCACGTGCGG
TTCCGGCTCG GCGCGATCAC CGCGATCGTC GGGCCGAACG GCTCGGGCAA GACCACGCTG
CTCGAAACGC TGCTCGGCTT CCGGCGCGGC GGCAGCGACG TGCGCGTGCT CGACGTGCCG
GCCGAACGCT TCATGTGCGA TTCGCGCTCG CTGCAGCGAA TCGGCGCGCA ATTGCAGAAG
GTCGAGTATC CCGATCATCT GCGTGTATCC GAGATCGTCG CGCTGCACCG CGCGATGTAC
GCACACACCG ATGCGGCGAT CACCGACGCG CTCGGCATCG CCGAACTGCT CGACAAGCCG
TGCCGCGCGC TGTCGAAGGG GCAGCGCCAG CGCGTGGACC TGTACGTCGC GCTCGCGCAC
CGGCCCGAAC TGGCCGTGCT CGACGAGCCG TTCACGGGCC TCGACCGTCG CTATGCGGGC
GTCGTGATCG ACCTGCTGCG CCACCGCGCG AGCGGCACGA GCGTCGCGAT GATCTGCCAT
TCCGAGGAGG AACTGAGCGT GGTCGACGAT CTCGTCTGGG TGCGCGACGG CGGCGTGCGC
TACCAGGGCG ACCAGGACAC GCTGCGCGCC GAGCTCGTCG GCGATGCGCG CGCGGTCCTG
CATTGCCGCG ACGCAGCCGA TGCGCGCGCG CTGCGCAAGC GGCTCGCGGC GCTGCCCGGC
GTGACCGGCG TGCGCGTGTC GGCCGCGCAC GTGGTCGAGG CGTTCGGCGA TGCGACGCTG
CATCCGAACG TGCACCGGAT CGTCGGAGAA CAAGGCATCC AGCATCTCGC GCTCGCGCCG
AGCACGCCGG GCGACCTGCT GCGCCTGTGC ACCGAGGGCC CGACCCATGA CTAA
 
Protein sequence
MSVSFLASVR AMFAPRAAFD RPRRAGTPPL PDAHAPGAAL GARAIDVAAG DFRFSARHVR 
FRLGAITAIV GPNGSGKTTL LETLLGFRRG GSDVRVLDVP AERFMCDSRS LQRIGAQLQK
VEYPDHLRVS EIVALHRAMY AHTDAAITDA LGIAELLDKP CRALSKGQRQ RVDLYVALAH
RPELAVLDEP FTGLDRRYAG VVIDLLRHRA SGTSVAMICH SEEELSVVDD LVWVRDGGVR
YQGDQDTLRA ELVGDARAVL HCRDAADARA LRKRLAALPG VTGVRVSAAH VVEAFGDATL
HPNVHRIVGE QGIQHLALAP STPGDLLRLC TEGPTHD