Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_5983 |
Symbol | |
ID | 4454711 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008544 |
Strand | - |
Start bp | 124247 |
End bp | 128662 |
Gene Length | 4416 bp |
Protein Length | 1471 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639698044 |
Product | YadA domain-containing protein |
Protein accession | YP_839609 |
Protein GI | 116686362 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG5099] RNA-binding protein of the Puf family, translational repressor |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00228839 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACAAGT CGTTCAAGTC GATCTGGAAC GAAGCACTGG GGGCCTGGGT TGCGGCTTCG GAGCTTGACC GCGCACGCGG CAAGCGTGTT GCGTCGTCGA CGCGCGCGCC GGAATGCGCC GCGCACGGAG AAGCCGCGAC GCACGCGGAC ATACCATCGG CGCCTTCGGT GTTGAAGCTG GCCGTGCTGA CGGCGACTGC TTGTCTCGGG TTGTTCCATG CGAGTGCGCA TGCGCAATAC GCGCAGGATG GCGGTACCGC GTCGGGCGGC ACGACGGCGA TCTCGATCGG CCTCGGTTCG ACTGCCGCGC AGCAGAATTC CACCGCGGTC GGCAACCTGT CGACGGCGCA GGGTTTGTCG GCCACGGCGC TCGGCCCGGG CGCACATGCG ATGGGCGATG GTTCGACGTC CGTCGGCATC AACTCGCAGG CGACCGGCGT CAACAGTTCG GCGCTCGGCG TGCAGGCGAT CGGTTCCGGC GACTATTCGG TCGCGATCGG CAACCTGTCG AGCGCGACCC AAAGCGGCGC GGTCGCGATG GGCAGCGGCG CGGCGGCGAC CGGTGTTTCC GCCGTCGGGC TGGGCAACAA CGCGCTGGCG TCCGGCCAGT ACGCGGCGGC GATGGGGCTC GGTGCCAGCG CGGCGGGCGC GCAGAGCGTC TCGCTCGGCT ATGCGTCGCA TGCTACGAAC ACGGGCTCCG TCGCGCTCGG CAACCAGTCG ACCAGTTCGG GCGCGGCCGG CGTGGCCGTC GGCAGCGGTG CGCTGACGAC CGGGAATTCC GGCGTGGCGA TGGGCGTGAA CAGCGGGGCG AAGGGCACCG CGTCGATCGC GATCGGCTGG GGCGGCACCG CCGGCGTGCC CGGGTCGGGC ACGCAGTCGC TCGGCACGAG TTCGATCGCG ATGGGCTCGA ACACGAATGC CGGCGCCGAT CAGGCGCTGG CCTTCGGCCT GAACGCCAAT GCGTCGGGCG TCAGTTCGAT CGCGATGGGT GTGCAGTCGA CCGCGACCCA GCAGTTTGCG ACCGCGCTCG GCAATCTGTC GCTGGCGACC GGTGTTTCCT CCAGCGCGCT GGGGCCCGGG GCGACGGCGT CGGCCACGAA TGCGACGGCG GTCGGTATCA ACAGCGTCGC GGCGGCGACG TCGACCGTGG CGATCGGCGA TTCCAACTCG GTTGCCGCGG CGGCAGGCGC GGGTTCGGTC GCGGGCGGCT ACGGCTCGAA GGTGCTGGGC GGTATCGGCG CCGTCGCGCT GGGCTATGGC CAGACGGTGA GCGGCAACGG CGCGGTAGCG ATCGGCGATC CGAGCACCGC GATCGGCACC GGCGCGGTCA CGATGGGGTC GAACAACACC GCGAACGGCG ACGGCGCGGT AGCGATCGGC AACACCAACA ATGCGCAGGG CACGGGTTCC CTGGCGCTCG GCAATACGTC GACGGCAGCG GCGGCGGGCG CCGTCGCGTT CGGCGCGTCG GCCGTCGCCA ACAACGCAAA CGATGTCGCG CTCGGCTCGG GATCGACGAC GGCCGCGCCG AATCCGACGG CCAGCGCGGT CATCGGCGGC GTCACGTACA ACTTCAACGG CATCAACCCG GCGAGCGTCG TCAGCGTGGG GAATGTCGGC GCCGAGCGCC AGATCACCAA CGTCGCGGCC GGGCGGATCA GTTCGTCGAG TACGGACGCG ATCAACGGGT CGCAACTCGC CGCGACGAAT ACGGCGCTCG ATTCATTGTC GACGTCGACG GCGTCGAGCA TCACGTCGTT GTCGACCGGG GTTTCGTCGC TGTCGACCGG TCTGAGTTCG ACCAATAGCG CGGTGACGTC GTTGTCGACT TCGACGTCGA CCGGGATCAG TTCGCTGTCG ACGGGGCTGA GCTCGACCAA TAGCGCCGTG ACATCGCTAT CGACTTCGAC GTCGACCGGC ATCAGCTCGT TGTCGACCGG CCTGAGTTCG ACCGACAGCA CGGTGACGTC GCTGTCGACG TCGACATCGA CGGGGCTGTC GTCGGCCAAT AGTTCGATCG CGTCGTTGTC CACCTCGACC TCGACGGGCA TCGGTTCGTT GTCGACCGGG CTGAGTTCGA CCGACAGTAC GGTGACGTCG CTGTCGACGT CGACCTCGAC GGGGCTGTCG TCGGTCAATA GTTCGATCAC GTCGTTGTCC ACCTCGACGT CGACGGGTAT CGGTTCGCTG TCCACCGGCC TGAGTTCGAC CAACAGTGCG GTGACCTCGC TGTCCACGTC CACGTCGACG GTCGTCGGAT CGTTGTCCAC GGGCTTGAGT TCGACCAACA GCTCGGTGAC GTCGCTGTCC ACGTCGACCT CGACGGGCAT CAGCTCGCTG TCCACCGGCC TGAGTTCGAC CAACAGTTCG GTGACGTCGC TGTCCACGTC GACGTCGACG GTCGTCGGCT CGTTGTCCAC CGGCCTGAGC TCGACCAACA GCAACCTGAC CTCGCTGTCC ACGTCGACCT CGACCGTCGT CGGCTCGCTG TCCACCGGCT TGAGTTCGAC CAACAGCTCG ATCACGTCGC TGTCCACGTC GACGTCGACG GTCGTCGGTT CGTTGTCCAC CGGCCTGAGT TCGACGAACA GCAATTTGAC CTCGTTGTCG ACCGCCACGT CGACCGGGAT CAGCTCGCTG TCGACGGGCC TCAGCTCGAT TGCGAACAAC AACACGAACC TCGGCAACAG CACGGCCGGC GCGATCGGCG GCGGCGCCAC CTACGATCCG ACCACCGGCA CGATCTCGTC ACCGTCGTAC GTGACGTACA ACAGCGACGG CTCGACGACG ATCAACAACA ACGTCGGCTC GGCAATCGAC AACATCAACG CGAACGGCAT CAAGTACTTC CACGCGAACT CGACCGCGCC GGACAGCCAG GCGCTCGGCC TGGACAGCGT CGCGATCGGA CCGAACGCGA TCTCGCGCGT GGACGGCAGC ATCGCGCTCG GCTCCGGTTC GGTGGCCGAT CGCGCCGTGG TGCCGTCGTC GGGCATCCTC CGCAACGGCA GTGCGTCGAT CCCGTTCGAC ACGACGGATC AAACGCTGCT CGGCGCGGTG TCGGTCGGCG ATGCGACTAA CAAGACGTAT CGCCAGATCA CCAACGTCGC GGACGGCACC GGCCAGCAGG ATGCGGTGAC GGTGCGCCAG TTGACCGGCG CGCTGCAGTC GTTCGCGGTC ACCGGCCAGA AGTACTTCCA CGCGAATTCG ACGGCGGCCG ATTCGCTCGC GGTCGGCGCG GAATCGGTCG CGGTCGGGCC AACGACGGTC GTCAACGGCG ACAACGGAGT GGGTATCGGC AACGGCGCGA TCGTCGACCA GACCGCGCCG GGCGGGATCG CGATCGGCCA GGCGGCGAGT TCCGCGCAGT CCGACGCGAT CGCGCTGGGT AGCGGCGCGA CGGCGACCGG CGCGCAGTCG GTCGCGCAAG GCGCGAATGC GGTGGCGGTC AGTGTCGGCA GCGTCGCGCT CGGCTCGGGG GCGCGCAGCA CGGCGACCGA TGCGCTCGCG CTCGGTGCCG GTGCGTCGGC GACTTTCGCG AACAGCGTCG CGCTCGGCGC CGGTTCGCTG ACCACGGTCG GCGCACTGAC GAACTACGTC GCGTACGGGT TGAGCAGCCC GCAGTCGTCG GCTGGCGAAA TCAACATCGG CAACCGCCAG ATCACCGGGC TCGCGGCCGG CAAGAACGGC ACCGACGCGG TGAACGTGTC GCAGCTCGAT TCGGTCGCGA GCCAGTTGAC GACGTTGATC GACCAGCGCA CGGCCAACCT CGGCGGGCAG TACACGACGA ACCCGAACGG CGCGAACGTG CCGCCGGGCG CGAGCGGTTC GAATTCGTCG GCGGGCGGCT CGGGGGCGGT TGCATCGGGC TCGAACAGCA CGGCGGTCGG CAACAATGCG CTCGCATCGG GCAACGGCTC TTCCGCGATC GGCGTGGGCG CCACGGCAGC GGGCAACAAC TCGACCGCGA TCGGCACGGG CAGCAACGAC GGCGGCCGCT CGAACGTGGT CGCGGTTGGC TCGGCGGATT CGGCGCGCCA GGTCGTGAAC GTCGCGGCCG GTACGCAGGG CACCGACGCG GTGAACGTGA ACCAGCTGAA CGCGGTATCG AACCAGTTCA CGCAGTCGCT GAACACGGTC AACAACCAGC TCACGCAGAT GCAGCAGCAG ATCCAGCAGA CCGATTCGAT GGCCCGCGAG GGGATCGCCG CGACCGCCGC GATGGCGTCG ATTCCGCACA TGGACCGCGA TTCGAACTTC GCGATGGGGG TCGGCACGGC GACGTTCCAG GGCCAGAAGG CCATGGCGGT CGGCGTGCAG GCGCGCGTCA CGGAGAACCT GAAGGCGACG CTGAACGGCG GTTTCGCCGG CAGCCAGCGC GTCGTCGGCG CGGGCATGCT GTATCAGTGG AAGTGA
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Protein sequence | MNKSFKSIWN EALGAWVAAS ELDRARGKRV ASSTRAPECA AHGEAATHAD IPSAPSVLKL AVLTATACLG LFHASAHAQY AQDGGTASGG TTAISIGLGS TAAQQNSTAV GNLSTAQGLS ATALGPGAHA MGDGSTSVGI NSQATGVNSS ALGVQAIGSG DYSVAIGNLS SATQSGAVAM GSGAAATGVS AVGLGNNALA SGQYAAAMGL GASAAGAQSV SLGYASHATN TGSVALGNQS TSSGAAGVAV GSGALTTGNS GVAMGVNSGA KGTASIAIGW GGTAGVPGSG TQSLGTSSIA MGSNTNAGAD QALAFGLNAN ASGVSSIAMG VQSTATQQFA TALGNLSLAT GVSSSALGPG ATASATNATA VGINSVAAAT STVAIGDSNS VAAAAGAGSV AGGYGSKVLG GIGAVALGYG QTVSGNGAVA IGDPSTAIGT GAVTMGSNNT ANGDGAVAIG NTNNAQGTGS LALGNTSTAA AAGAVAFGAS AVANNANDVA LGSGSTTAAP NPTASAVIGG VTYNFNGINP ASVVSVGNVG AERQITNVAA GRISSSSTDA INGSQLAATN TALDSLSTST ASSITSLSTG VSSLSTGLSS TNSAVTSLST STSTGISSLS TGLSSTNSAV TSLSTSTSTG ISSLSTGLSS TDSTVTSLST STSTGLSSAN SSIASLSTST STGIGSLSTG LSSTDSTVTS LSTSTSTGLS SVNSSITSLS TSTSTGIGSL STGLSSTNSA VTSLSTSTST VVGSLSTGLS STNSSVTSLS TSTSTGISSL STGLSSTNSS VTSLSTSTST VVGSLSTGLS STNSNLTSLS TSTSTVVGSL STGLSSTNSS ITSLSTSTST VVGSLSTGLS STNSNLTSLS TATSTGISSL STGLSSIANN NTNLGNSTAG AIGGGATYDP TTGTISSPSY VTYNSDGSTT INNNVGSAID NINANGIKYF HANSTAPDSQ ALGLDSVAIG PNAISRVDGS IALGSGSVAD RAVVPSSGIL RNGSASIPFD TTDQTLLGAV SVGDATNKTY RQITNVADGT GQQDAVTVRQ LTGALQSFAV TGQKYFHANS TAADSLAVGA ESVAVGPTTV VNGDNGVGIG NGAIVDQTAP GGIAIGQAAS SAQSDAIALG SGATATGAQS VAQGANAVAV SVGSVALGSG ARSTATDALA LGAGASATFA NSVALGAGSL TTVGALTNYV AYGLSSPQSS AGEINIGNRQ ITGLAAGKNG TDAVNVSQLD SVASQLTTLI DQRTANLGGQ YTTNPNGANV PPGASGSNSS AGGSGAVASG SNSTAVGNNA LASGNGSSAI GVGATAAGNN STAIGTGSND GGRSNVVAVG SADSARQVVN VAAGTQGTDA VNVNQLNAVS NQFTQSLNTV NNQLTQMQQQ IQQTDSMARE GIAATAAMAS IPHMDRDSNF AMGVGTATFQ GQKAMAVGVQ ARVTENLKAT LNGGFAGSQR VVGAGMLYQW K
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