| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5963 |
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| Symbol | |
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| ID | 4454691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008544 |
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| Strand | + |
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| Start bp | 95351 |
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| End bp | 96607 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639698024 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_839589 |
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| Protein GI | 116686342 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0363452 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACGC CCATTCTCCC GAACCACGCG CACCACCCCA TGACGTGCAG GCCGCGCCAG
CTGTTTGCCG CACTCTCGAT ACTTGCGATA GTCGGAACCG CCGGCTGCAA CAGGCAAACC
GGCGCACCGC CCGGCGGCTT CGCCGCGCAG ACCGCACAGG TGGGCGTGCT CTCGCTCGCG
CCGCAGCGCA TCGTCGAAAC CACCGAACTC TCCGGCCGCC TTTCCTCGCA GAAGGTCTCC
GACGTGCGAC CGCAGGTGAG CGGCATCATC CTCAAGCGCC TGTTCATGGA AGGCGGCGAC
GTGAAGGCGG GCCAGGTGCT CTACCAGATC GATCCGGCCA CCTACCAGGC TGCCTACGAC
CAGGCGCGCG GCACGCTGGA AAACGCCCGC GCCACGCTGG CCTCCGCGAA GACGAAAGCG
GACCGCTTCA CCGAACTCGT GAAGATCAAC GCCGTGAGCA AGCAGGACTA CGACGACGCC
GTCGCCGCGG TTCGCGAAAA CGCCGCGAGC GTCACGGCCG ACGAGGCGGC GCTCGAATCC
GCGCGCGTGA ACCTCGAATA CACGCACGTG CGTGCGCCCA TCTCCGGACG CATTGGCGCA
TCGACCGTGA CGGAAGGCGC GCTCGTCACC TCGAACCAGA CCACCGCGCT CGCCACCATC
CAGGCGTTCG ACCAGATGTA CCTCGACGTC ACGCGCCCCA GCACGGAATG GCTGAGGCTT
CGCAAGGCCT TCGCTTCCGG GCGCCTGAAG AAGACGGGCA GCGACAGCGC CGCCGTCACG
CTCGTGATGG AAGACGGCAC CGAATACGCC CACCCCGGCG CGCTGCAGTT CTCCGGCGTC
ACGGTGGACG CCACCACGGG TTCGGTCACG CTGCGCAGCA CGTTCCCGAA CCCCGAACGC
GAATTGCTGC CCGGCATGTT CGTGCGCGCC CGCCTGGAAG AAGGCGAGAA CGACAACGCG
ATACTCGTGC CGCAGATGGC CGTGACGCGT GCGTCAGACG GCAAGGCGAG CGTCTACGTC
GTGGATGCGG CCGGCAACGC GCGGCAGGTG CAAGTCACGG CCGACAACGC ATTCCGGGAC
CAATGGATCG TGACCTCAGG CCTGCACACC GGCGACCGCG TGATCGTGAG CGGCCTGCAG
AGCGTGCATG CGGGCGCGCC GGTCAAGGTG GCGGCCGATA CGCCGCAGAC GCAGGCGAAC
GCGGCATCCG CGGCACCCGC GACGGACACG GCCTCGACCG TGTCGGCACA ACGCTAG
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| Protein sequence | MKTPILPNHA HHPMTCRPRQ LFAALSILAI VGTAGCNRQT GAPPGGFAAQ TAQVGVLSLA
PQRIVETTEL SGRLSSQKVS DVRPQVSGII LKRLFMEGGD VKAGQVLYQI DPATYQAAYD
QARGTLENAR ATLASAKTKA DRFTELVKIN AVSKQDYDDA VAAVRENAAS VTADEAALES
ARVNLEYTHV RAPISGRIGA STVTEGALVT SNQTTALATI QAFDQMYLDV TRPSTEWLRL
RKAFASGRLK KTGSDSAAVT LVMEDGTEYA HPGALQFSGV TVDATTGSVT LRSTFPNPER
ELLPGMFVRA RLEEGENDNA ILVPQMAVTR ASDGKASVYV VDAAGNARQV QVTADNAFRD
QWIVTSGLHT GDRVIVSGLQ SVHAGAPVKV AADTPQTQAN AASAAPATDT ASTVSAQR
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