| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5852 |
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| Symbol | |
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| ID | 4452791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | - |
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| Start bp | 2983054 |
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| End bp | 2984658 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639697913 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_839478 |
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| Protein GI | 116693945 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTATAA CACCAAAGGC AATCGCGGGG CTGCGGGCGC TCACGCCCGG CTCGACACTC
CTCTTCCACC GCAGCGGCGC GTGGCCGCGC GTCATGTTTC TCGCCGCCGT GATCATTTGC
GTGCTCGTGC CCGCGTTCGC GATCGTACTG GCCGACCGCT ACGCACGCGA TGCCGTCACA
GCGAACGAGC GCGCCGTGGC AAACGACATC GTGGCTTCGG TGGACCGCAT CCTGGACGGC
GTGCGCCTCC GACACGCGGA CGAGCTGAGC GCGCTCGTCG GGCGGCCATG CGCGACGGTG
TTCCGGACAC TCGCCGAAGT GGGCACTCGC CTGCGCTATC TGCGTGCGGT CGGGCTGGTG
AGCGACGGCC GCCTCATGTG CTCGTCGGCG CTCGGTTCGA TCGACCTGCC GCTCACCGCG
TATGCGCGCG AGCCGGAACC GGGCTCGATG GCCGTCACGC TGCTCCGCCA GACGCCGTTC
CAGCATGGCA TTCCGGTGCT GTCCGTATTC CGATCCACCG CGCGCGGCGC GGGCGTCCTG
TATGTGATCG AGAGCGACTA CGTGGCCGAC GCACTCGCCC ACGGCACCGG CAACGGGGCG
GAAACGGCCA CGCTGTCGAT CGCGGGTGCA GGTCGTCTCG ATCAGCACGG GAAGTTCTCG
CCGGAAACGG AAGCGGCCCC CGCAGGCGGC AGCACGATCG CTTCGCAGCG CTGGCCGTTC
ACGGTGTCGG TCATCGCATC GGCGCGCTAC GCGTCACAGG TCCAGCGCCA TTACCGGCTG
ATCTGCGCGA CGATCGTGCT GCTCGCCGAC AGCCTCGTGA TGGCCGCCTA CCTGCTCGCG
ATGGCACCAC GGCGGCTGTT GCTGAAAGCC GTGCGCCACG CGCTCAGGCG CGACGAGTTC
CATGTGGTGT ATCAGCCGAT CGTCGACGTG CAGACGCGCA GGACGGTCGG CGTCGAGGCG
CTGCTGCGCT GGCACCATCC GAAGTGGGGG GCCATCAGCC CGGCCGTGTT CATCCCGCAG
GTGGAATCGA GCACGGTGCT GCCGAAGGTC ACCGAGTTCG TGCTGCGCAC GGCGGTCGCC
GAGCTGACCG CGCTGACGCC GTCCGCGCCG CTGCGCATTG CCGTGAACAT TGCGCCGCAG
GATCTCGAGC GCGGGCGGTT CGTGACCGAC GTCGAGGCAG CGATCCGCGC GCTGCCGCCC
GGCTTCACGC TGGTGCTCGA AGTCACCGAG CGCATCCTGC TCGAGAAAAA CGCGCGCACC
ACCGAGATCT TCCATGCATT GCGATCGAAA GGCGCGAAAT TCGCGATCGA CGATTTCGGC
ACGCATCACA GCAATCTCGA CATGCTGTCG CGCTTTCCGT TCGACTACGT GAAGATCGAT
CGACAGTTCG TGTCGCAACT GGACAGCGGC AGCTCGAGGC TGATCGAGGG AATCGCAGCC
GTCGCGCATC ACTACGGCCT GAAGATCATC GCGGAAGGCG TGGAAACCGA AGCGCAACAT
CGCGCGCTGC ATGCGGTCGG GATCCAGTAC GCGCAGGGCT ACCTGTACCA GCGGCCGTTG
CGCGCGGAGA ACCTGCAGCG CGATTTCGCC GGGGCAACGG TGTAA
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| Protein sequence | MRITPKAIAG LRALTPGSTL LFHRSGAWPR VMFLAAVIIC VLVPAFAIVL ADRYARDAVT
ANERAVANDI VASVDRILDG VRLRHADELS ALVGRPCATV FRTLAEVGTR LRYLRAVGLV
SDGRLMCSSA LGSIDLPLTA YAREPEPGSM AVTLLRQTPF QHGIPVLSVF RSTARGAGVL
YVIESDYVAD ALAHGTGNGA ETATLSIAGA GRLDQHGKFS PETEAAPAGG STIASQRWPF
TVSVIASARY ASQVQRHYRL ICATIVLLAD SLVMAAYLLA MAPRRLLLKA VRHALRRDEF
HVVYQPIVDV QTRRTVGVEA LLRWHHPKWG AISPAVFIPQ VESSTVLPKV TEFVLRTAVA
ELTALTPSAP LRIAVNIAPQ DLERGRFVTD VEAAIRALPP GFTLVLEVTE RILLEKNART
TEIFHALRSK GAKFAIDDFG THHSNLDMLS RFPFDYVKID RQFVSQLDSG SSRLIEGIAA
VAHHYGLKII AEGVETEAQH RALHAVGIQY AQGYLYQRPL RAENLQRDFA GATV
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