| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5836 |
|---|
| Symbol | |
|---|
| ID | 4452724 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | + |
|---|
| Start bp | 2968582 |
|---|
| End bp | 2969571 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639697897 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_839462 |
|---|
| Protein GI | 116693929 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACATGC TCGAGAACAT GCGGACGTTC GTTCGCGTCG TGCAGGCCGG CAGCTTCTCC
GCCGTGGCGA AGCAGACCGA TGTCGCGACC GCGCAGGTGT CGCGGGCCGT CGCGAGCCTG
GAGGCGTATG CGCAGATTCG TCTGTTGAAC CGGACCACCC GGAAAATCGC ACTGACCGAC
AGCGGGCGCC GCTATTTCGA GCGCCTGCAA TCGATTCTCG GCGATGTCGA CCAGGCGAAT
GCCGAGGCCC GGAACGCGCT GGTCCGCCCG TACGGACGCT TGCGCGTGCA TACGATGCCG
GGGCTCGGGC AGAGCCATGT GACCGCGTTG GCCGTCGCCT ATCGGGCGCG CTTTCCCGAA
GTCGCCATCG AGATGACTTA TTCGCAACGG ATGCCCAATC TCGTCGAGGA AGGCTACGAC
GTATCGGTCG TCACGGCCGC GAGCCTGCCT GATTCCGCCT GCATCGCGCA TTCATGCGGC
ACGTCGTTCA GCGTGCTGGT TGCGTCGCCG GCCTACCTGG CTCGCCACGG CGTGCCGTCC
GCGCCCGCCG ACCTGGCACG CCATACCTGC CTGCGCCTCG ATACGCCGGC CGAAGCGAAC
GACGAATGGC TGCTGCACGG CCCCGGCGGC CAGACCGCGT CGCATGCGGT CACGGCCGCG
CCGTTCCACG CGAATGCGCC GGAGGCGCTG TCGATCGCGC TGCGCGCGGG GCTGGGCATC
GGCTCGCTGG CGATCTATTC GGCGATCGAC GACCTGCGCA GCGGGCGGCT CGTGCGCGTG
CTGCCGGACT ACCGGTTGAC GATGCTCGAC GTTTACGCGA TGTATGCGTC GCGCCGCTTC
CTGGACGCGA AGGTTCGCAC CTTCGTCGAG CATCTGCGCT TGGGGTTGTC GCCCGCGCTG
AAAGCCGACG CCCGCGCGCT CGACGCGCTC GCGGCGCCGC GCGGCCGCGA GCGTGCCCGT
GCCCGTGCGG TGGCCGGTGT CACGGCCTGA
|
|---|
| Protein sequence | MDMLENMRTF VRVVQAGSFS AVAKQTDVAT AQVSRAVASL EAYAQIRLLN RTTRKIALTD
SGRRYFERLQ SILGDVDQAN AEARNALVRP YGRLRVHTMP GLGQSHVTAL AVAYRARFPE
VAIEMTYSQR MPNLVEEGYD VSVVTAASLP DSACIAHSCG TSFSVLVASP AYLARHGVPS
APADLARHTC LRLDTPAEAN DEWLLHGPGG QTASHAVTAA PFHANAPEAL SIALRAGLGI
GSLAIYSAID DLRSGRLVRV LPDYRLTMLD VYAMYASRRF LDAKVRTFVE HLRLGLSPAL
KADARALDAL AAPRGRERAR ARAVAGVTA
|
|---|
| |