Gene Bcen2424_5778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5778 
Symbol 
ID4452019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2900525 
End bp2901250 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content62% 
IMG OID639697839 
ProductOmpW family protein 
Protein accessionYP_839404 
Protein GI116693871 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3047] Outer membrane protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.923655 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGAA TCAGCGCAGG AACCGTCGTA CTGGTCGCGG CCATCTCTGG CGCGCATGCT 
CAATCAGCCG GCCAGTGGGT AGTCAATGCC GGCTGGTCCC ATTTCGCGCC GCAGGGGTCG
GCTGATCCGC TGACCGTCAA TGCGCTCGGC CAGTCACAAG TGATGACCGG CAGCGGTGGG
GAGATCGCAA GCGGCGATAC GTTCGGCCTG ACCGCAACGT ACTTCCTGAC CGACCATATC
GCGGCGACGA CGGTCATGGG TTTTCCGCCG ACATGGCACT TGAACGGCGC AGGTACGCTC
AGCGGTTTCG GCGAGCTGGG GACCGCGCGG GCCTGGAGTC CGGCGATCAT CTTCAACTAC
TACTTCGGCC AGCCGAATGC ACGGTTCAGG CCGTATCTGG GCGCCGGCGT CACCTACACG
TGGTTCAGCA ACATCAAGCT CAGCAACCCC GTTTCCACCG GCCAGATCTA TTTCTCGCCG
ACCGTCGGGA CAGCGCTCGA GGGGCCGACA TCCGTGTCAC TCAGCAATTC CTTTGCGCCC
GTCGTCAACG GCGGCCTGAC CTACAACATC GATTCTCACT GGTCGATCAA CGCATCGGTG
GCGTATTCGT GGGTATCGAC ACGCGCCACG CTCACTACCC GGTCATCCGT CGGCACGGTC
ACGAGCACCA GCAAATTCCG GGTCAATCCG ATCGTGACGT TCCTTTCGGT CGGATACCGC
TTCTGA
 
Protein sequence
MKRISAGTVV LVAAISGAHA QSAGQWVVNA GWSHFAPQGS ADPLTVNALG QSQVMTGSGG 
EIASGDTFGL TATYFLTDHI AATTVMGFPP TWHLNGAGTL SGFGELGTAR AWSPAIIFNY
YFGQPNARFR PYLGAGVTYT WFSNIKLSNP VSTGQIYFSP TVGTALEGPT SVSLSNSFAP
VVNGGLTYNI DSHWSINASV AYSWVSTRAT LTTRSSVGTV TSTSKFRVNP IVTFLSVGYR
F