Gene Bcen2424_5674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5674 
Symbol 
ID4452170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2794443 
End bp2795081 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content67% 
IMG OID639697735 
ProductTetR family transcriptional regulator 
Protein accessionYP_839300 
Protein GI116693767 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.166194 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00758562 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGGACA GGACCAAGAC AGGGATCAGG ACAGGGAAAG ACGACGGGGC GGCGGGCAAG 
CCGCGCACGA AGCCGGCGGA AGTCCGCCTC GAAGAGCTGA TGGCCGCGGC CGAGACGCTG
TTCCTCGCGC AGGGCGTCGA GGCGACGACC ATCAGCGAGA TCGTCGAGCA CGCGCAGGTC
GCGAAGGGCA CGTTCTATCA CTACTTCGAA TCGAAGGCCG ACATGCTCGC GGCGCTCGCG
CAGCGCTACA CGGCATCCTT CCTCGACCAG TTGCAGCACG CGGTGAACGG GTGCGACGCC
GACGACTGGC TCGCGCGCCT GCGTGCGTGG ATCCGCGCCA GCATCGAAAT CTACGCGGCG
ACTTATCGCA CGCACGACAT CGTCTACACG AACCATCATC ACCACGATCG CGAGAATGCC
GACAAGAACG CGATCCTCGA GCAGCTCGGT GCGATTCTCG ACGGTGGCGT CCGGGCCGGC
GCCTGGCGGC TCGCGCACCC GCCAGTCACC GCGCTGCTGA TCTACGCCGG CGTGCACGGC
GCGACCGACC ACATCATCGC GTCGCCGGAA ACGGATCGCG CCGCGTTCGT CGATGCGGTG
GTCGACGATT GCCTGCGGAT GCTCGGTGTC GGCACATAG
 
Protein sequence
MTDRTKTGIR TGKDDGAAGK PRTKPAEVRL EELMAAAETL FLAQGVEATT ISEIVEHAQV 
AKGTFYHYFE SKADMLAALA QRYTASFLDQ LQHAVNGCDA DDWLARLRAW IRASIEIYAA
TYRTHDIVYT NHHHHDRENA DKNAILEQLG AILDGGVRAG AWRLAHPPVT ALLIYAGVHG
ATDHIIASPE TDRAAFVDAV VDDCLRMLGV GT