Gene Bcen2424_5640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5640 
SymbolaraG 
ID4452000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2753611 
End bp2755158 
Gene Length1548 bp 
Protein Length515 aa 
Translation table11 
GC content69% 
IMG OID639697701 
ProductL-arabinose transporter ATP-binding protein 
Protein accessionYP_839266 
Protein GI116693733 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.273168 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0496803 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATGC AGACGATGAC GGCCGCGTCC GGCCACGACG CCGAAGCGGG TACGCCGCCG 
GACGGCCCGC TGCTCGCGCT CGACGGCATC ACCGTGACGT TTCCGGGCGT GCGTGCGCTC
GACGCGGTGT CGCTGTCGGT GCGCGCGGGC GAAGTGCACG GGCTGATGGG CGAGAACGGC
GCGGGTAAAT CGACGCTGCT GAAGGTGCTG TCCGGTGTGA ACCAGCCGCA GGCCGGCACG
CTGACGCTGA ACGGCACCGC GCAGCGTTTC GCGTCGACGC GCGCGGCGCT CGAGGCCGGC
ATCGCGATCA TCTACCAGGA ACTGCATCTG GTGCCCGAGC TGACGGTCGC GGAAAACCTG
ATGCTCGGGC AATTGCCGAG CCGGCTCGGC GTGGTCGACG AGCGCACGCT CGCGGCACGC
GCGCTCGATG CGCTGGAGCG GCTCGGCGAG CACATCGATC CGGGCATCCC GGTGAAATAT
CTGTCGATCG GCCAGCGCCA GATGATCGAG ATCGGCAAGG CGCTGATGCG CCATGCGCGC
GTGATCGCGT TCGACGAACC GACGAGTTCG CTGTCCGCAC GCGAGACCAC GCAACTGTTC
CGGATCATCC GCGCGCTGCG CGCGGAAGGC CGCGCGATCA TCTACGTCAC GCACCGGATG
GAGGAAGTCT ACGAACTGTG CGACCGCGTG ACGGTGTTTC GCGACGGCCG CCGCATCGAC
ACGTTCGATT CCGTCGCCGA TCTCGACCGC GACCGGCTGA TCGGCTGCAT GGTCGGCCGT
TCGATCGAGG ACGTGTACGG CTACCGGTCG CGCCCGGCCG GCGACGTACT GATCGAAGCG
AAAGGGTTGG CGGGGCCGGG GCTGGCCGAG CCCGTGTCGT TCACCGCGCG GCGCGGCGAG
ATCGTCGGCT TCTTCGGGCT CGTCGGCGCG GGCCGCTCCG AGCTGATGAA GCTGCTGTAC
GGCGCCGTGC GACCGAGCGC CGGGCACGTC GAGCTGAACG GCAAGCGGGT GGCGTTCGGC
AGCCCGCGCG ACGCGGTGCG CGCCGGCATC GCGCTGTGCC CGGAAGACCG CAAGCAGGAA
GGCATCGTCG CGATCGCGTC GGTGGCCGAC AACCTGAACA TCAGCGCGCG CCGTCATTTC
AGCCCGGCGC GCGTGCTGCT CGACGGGCGA CGCGAACGCG AGCTTGCGCA GAAATACATC
GAGCGGCTCG CGATCAAGAC CCGCGACGGC GACACGCCGA TCGGCGCGCT GTCGGGCGGC
AACCAGCAGA AGGTCGTGCT CGCGCGCTGG CTGGCCGAGC GCATCGACGT GTTCCTGATG
GACGAGCCGA CGCGCGGCAT CGACGTCGGC GCGCGCGCGG AAATCTACAA CCTGTTCTAC
GAACTCGCGG AAGCGGGCCG CACCGTGATC CTCGTGTCGA GCGATCTGGC CGAGGTGATC
GGCGTGTCGG ACCGCATCGT CGTGATGAAG GAAGGACGGA TTGCGGGCGA GGTTGCGAAG
GCGCACGCGA CGCCCGATGC ACTGATCAAG CTCGCGCTGC CGCGCTAG
 
Protein sequence
MTMQTMTAAS GHDAEAGTPP DGPLLALDGI TVTFPGVRAL DAVSLSVRAG EVHGLMGENG 
AGKSTLLKVL SGVNQPQAGT LTLNGTAQRF ASTRAALEAG IAIIYQELHL VPELTVAENL
MLGQLPSRLG VVDERTLAAR ALDALERLGE HIDPGIPVKY LSIGQRQMIE IGKALMRHAR
VIAFDEPTSS LSARETTQLF RIIRALRAEG RAIIYVTHRM EEVYELCDRV TVFRDGRRID
TFDSVADLDR DRLIGCMVGR SIEDVYGYRS RPAGDVLIEA KGLAGPGLAE PVSFTARRGE
IVGFFGLVGA GRSELMKLLY GAVRPSAGHV ELNGKRVAFG SPRDAVRAGI ALCPEDRKQE
GIVAIASVAD NLNISARRHF SPARVLLDGR RERELAQKYI ERLAIKTRDG DTPIGALSGG
NQQKVVLARW LAERIDVFLM DEPTRGIDVG ARAEIYNLFY ELAEAGRTVI LVSSDLAEVI
GVSDRIVVMK EGRIAGEVAK AHATPDALIK LALPR