Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_5599 |
Symbol | |
ID | 4453303 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | + |
Start bp | 2712691 |
End bp | 2713500 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639697660 |
Product | diaminopimelate epimerase |
Protein accession | YP_839225 |
Protein GI | 116693692 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0253] Diaminopimelate epimerase |
TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.693414 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGATCG CATTTCTGAA GATGAACGCG AATGGCGATG ACTTCGTCAT CGTCGACCTG CGCGGTCACG AACACGATCG CGCGCATCCC GTCGACGGCG ACCTCGTGCG GCGCATGGGC GATCGGCATC GCGGCATCGG CTTCAACCAG CTCGCGGTGA TCTCGGACGG CAACGACGCG GCCGCGCGCG TCGCGTTCTG GAATCCCGAC GGCTCGACGC TCGATACCTG CGGCAGCGCG ACGCGCGGCG TCGCGTGGAA GCTGATGCGG GAAACCGGTG CGACATCGGT CGTGCTGCGC ACGAATCGCG GGCGCCTGCA CTGTTCGCAG GATGCGGACG GGCTGATCAA GGTCGACATG GGCGCGCCGC GGCTCGGCTG GCAGGACGTG CCGCTCTCGG AAGCCATCGA CACGCTCGCG CTGCCGCTGC CCGGTGCGCC GGCCGCATGC AGCATGGGCA ATCCGCATTG CACGTTCTTC GTCGACGATG TCGGCACGAT CGACATCGAA GCGCTCGGCC CAACCATCGA AACGCATCCG CTGTTTCCGC TGAAGACCAA CGTGCATTTC GTTCAGGTCA TCGATCGATC GCATATCCGT CTACGTATCT GGGAACGCGG CGGCGGCGTG CCGCTCGGCT CCGGCTCGTG TTCGTGCGGC GCGGCGGTCA ACGGCATCCG GTGCGGGCTG CTCGACGATA CCGTGCGGGT GACCTGCGAC GGCGGCGACG TCATCGTTCA ATGGGACGGC GCCGGCAGCG TGTTCCTGAG CGGCCCCGTG ACGTTCGGGT TCAGCGGAGT GTGGCCGTGA
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Protein sequence | MPIAFLKMNA NGDDFVIVDL RGHEHDRAHP VDGDLVRRMG DRHRGIGFNQ LAVISDGNDA AARVAFWNPD GSTLDTCGSA TRGVAWKLMR ETGATSVVLR TNRGRLHCSQ DADGLIKVDM GAPRLGWQDV PLSEAIDTLA LPLPGAPAAC SMGNPHCTFF VDDVGTIDIE ALGPTIETHP LFPLKTNVHF VQVIDRSHIR LRIWERGGGV PLGSGSCSCG AAVNGIRCGL LDDTVRVTCD GGDVIVQWDG AGSVFLSGPV TFGFSGVWP
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