| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5510 |
|---|
| Symbol | |
|---|
| ID | 4453459 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | + |
|---|
| Start bp | 2611101 |
|---|
| End bp | 2612153 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639697571 |
|---|
| Product | porin |
|---|
| Protein accession | YP_839136 |
|---|
| Protein GI | 116693603 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3203] Outer membrane protein (porin) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACGGA AAGCATTCCT GGTCGGCGCG TGCGTGCTGT GCGCCACGCC GGCGCACGCG
TCGTCGGTCA CGCTGTACGG GATCGTCGAC AGCTACGTCG AATTCGATCG CATCGGCAGT
CTATCGAGCA TGCGGCAAAG CGGCGGTGGC GCGTCGACGA GCCGCTTCGG CCTGACGGGC
GTCGAGGATC TCGGCGGCGG CACGTCGACG AAATTCGTGC TGGAAAGCGG TTTCTCGCCG
GCCGACGGAT CGTTCCAGGG CGGCACGCTG TTCTACCGGC AGGCGTACGT GTCGCTGCAG
AACACGCGCT ACGGCGACCT GCGGCTCGGC CGGCAATACA CGCCCGCGTT CTACGTCGTG
TACGACGGCG ATCCGTTCGG ACTCAACGAA CGGCTGTCGC CGCTTGCGCT GCTCGCCACG
TCGACGGACA CGATCACGAG CAACACGACG CCGCCGATTC CGCGCTTCAA CCAGGCGGCG
TCGTACCTGA GCCCCGACTG GAACGGCCTG CGCGTGATGG CCACGTACGG CTTTCCGACG
CCGAACGCGC TCTCGACGCA GGCTGGACGC AACTACGGCG CCGGGCTGCA GTACCGGATC
GGCGGGCTGT ACGTCGGCGC CGGCTTCCAG GGCGATACGT CGGCCGGCAA CCTCGCACCC
GTCATCTCCC CGTCGACGAC CCGCCACTAC GTGTTCGCGG CCAACTACGC GTTCGCGCGC
GTCAAGCTGT ACGCCGCGTT CCTGTACGGC GTCGGCACGG CCGCGCGCCT GCCCGCGTTC
TCGACCGCGA GCGTCGGCGC GTCGATCAAC GTCGGTGCGC TCGATCGCGT GCTCGTGTCG
GTGGTGCGCC GCGACGTGAA GGGCTCGGCG AACGACGCGA CCGCGCTCGG CGTCGGCTAC
GACCATCCGC TGTCGAAGCG GACCTCGCTC TACGCCCGCT ATCTCTACAT GAAGAACGGC
GGCGACGCCC GCAATACCGT CGTCGCCGGC CTGCAGCCGC AACCGGGCGG CACCGAGCAG
GTGTTCGCGC TCGGCATCGT TCACCGCTTC TGA
|
|---|
| Protein sequence | MQRKAFLVGA CVLCATPAHA SSVTLYGIVD SYVEFDRIGS LSSMRQSGGG ASTSRFGLTG
VEDLGGGTST KFVLESGFSP ADGSFQGGTL FYRQAYVSLQ NTRYGDLRLG RQYTPAFYVV
YDGDPFGLNE RLSPLALLAT STDTITSNTT PPIPRFNQAA SYLSPDWNGL RVMATYGFPT
PNALSTQAGR NYGAGLQYRI GGLYVGAGFQ GDTSAGNLAP VISPSTTRHY VFAANYAFAR
VKLYAAFLYG VGTAARLPAF STASVGASIN VGALDRVLVS VVRRDVKGSA NDATALGVGY
DHPLSKRTSL YARYLYMKNG GDARNTVVAG LQPQPGGTEQ VFALGIVHRF
|
|---|
| |