| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5478 |
|---|
| Symbol | |
|---|
| ID | 4451348 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | + |
|---|
| Start bp | 2575659 |
|---|
| End bp | 2577071 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639697539 |
|---|
| Product | cytochrome bd ubiquinol oxidase, subunit I |
|---|
| Protein accession | YP_839104 |
|---|
| Protein GI | 116693571 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1271] Cytochrome bd-type quinol oxidase, subunit 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0727881 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACACCG CACTTTCGGC CCTCGATCTG GCCCGCCTGC AATTCGCGTT CACCGTCTCC
TTTCACATCG TCTTCCCGGC GCTGAGCATC GGCCTCGCCA GCTTCATCGC CGTGCTCGAA
TATCGCTGGC TGAAGACCGG CAAGCAGTAC TACAAGACCC TCTGCCTGTT CTGGTCGAAG
ATCTTCGCGG TCGCGTTCGG AATGGGCGTC GTGTCCGGCG TCGTGATGAG CTATCAGTTC
GGCACCAACT GGTCGGGCTT CTCGAGCTTC GCCGGCGCCG TCACCGGCCC GCTGCTGATG
TACGAGGTCA TGACCGCGTT CTTCCTCGAG GCCGGCTTCC TCGGCATCAT GCTGTTCGGC
TGGAACCGCG TGAGCCCGCG CGCGCACTTC GGCGCGACGC TGATGGTCGC GATCGGCACG
CTGATCTCGA CGTTCTGGAT CCTCGCGTCG AACAGCTGGA TGCAGACGCC GCAGGGCTTC
GAGATCGTCG ACGGCCGCGT CGTGCCGACC GACTGGTTCG CGATCATCTT CAACCCGTCG
TTCCCGTACC GCCTGTTCCA CATGGCGATC GCCGCGTTCA TCGTCGCCGC GCTCGTGGTG
GCCGCGACCG GCGCGTGGCA CCTGCTGAAG GGCCGCCGCG ACAAGGGCGT GAAGAAGATG
TTCTCGATGG CGCTGTGGCT GCTGCTGGTG CTCGCGCCGC TGCAGGCCGT GATCGGCGAC
CAGCACGGCA TCAACACGCT GAAGCACCAG CCCGCGAAGA TCGCCGCGAT CGAGGGGCTG
TGGGAAACCG AGAAGGGCGG CACCGCGCTC AACCTGTTCG GCATTCCGGA CATGCAGGCG
GAAACGACCC GCTACGCGGT GAAGGTGCCG CACCTCGGCA GCCTGATCCT CACGCACAGC
TGGGACGGCG AGATCCGCGG GCTGAAGGAC TTCCCGCCGC AAGACCGCCC GAATTCGACG
GTCGTGTTCT GGAGCTTCCG GATCATGGTC GGCCTCGGCT TCGCGATGAT CGGCCTCGCC
GCGCTCGCGT GGCTGCTGCG CCGCCGCGGC CGCCTGTATG AATCGAAGTG GTTCCAACGC
TTCGCGCTCG TGATGGGCCC GACCGGTTTC GTGTCGCTGC TCGCGGGCTG GGTCACGACC
GAAGCCGGCC GCCAGCCGTG GGTCGTGTAT GGCGTGATGC GCACCGCGCA GGCCGTGTCG
CCGCTGTCGG TGCAGCAGGT CAGCCTGTCG ATGATGACGT TCGTGATCGT GTACTTCCTC
GTGTTCGGCA CCGGCGTGTA CTACATGCTG AAGCTGATGA AGGCCGGCCC CGCGCTGCCC
GACGTCGAGC ACGACGATAA ACCGGACACG CGCCCCGATC ACACCGCGCG CCGCCCGATG
TCCGCCGTCG ACGAGCTGAT CGAGACCGTC TGA
|
|---|
| Protein sequence | MDTALSALDL ARLQFAFTVS FHIVFPALSI GLASFIAVLE YRWLKTGKQY YKTLCLFWSK
IFAVAFGMGV VSGVVMSYQF GTNWSGFSSF AGAVTGPLLM YEVMTAFFLE AGFLGIMLFG
WNRVSPRAHF GATLMVAIGT LISTFWILAS NSWMQTPQGF EIVDGRVVPT DWFAIIFNPS
FPYRLFHMAI AAFIVAALVV AATGAWHLLK GRRDKGVKKM FSMALWLLLV LAPLQAVIGD
QHGINTLKHQ PAKIAAIEGL WETEKGGTAL NLFGIPDMQA ETTRYAVKVP HLGSLILTHS
WDGEIRGLKD FPPQDRPNST VVFWSFRIMV GLGFAMIGLA ALAWLLRRRG RLYESKWFQR
FALVMGPTGF VSLLAGWVTT EAGRQPWVVY GVMRTAQAVS PLSVQQVSLS MMTFVIVYFL
VFGTGVYYML KLMKAGPALP DVEHDDKPDT RPDHTARRPM SAVDELIETV
|
|---|
| |