| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5455 |
|---|
| Symbol | |
|---|
| ID | 4453144 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | - |
|---|
| Start bp | 2555071 |
|---|
| End bp | 2555775 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639697516 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_839081 |
|---|
| Protein GI | 116693548 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.319749 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCG AAGGTGCAGT CGTTTTCATC ACGGGCGCGA ACCGCGGGCT TGGCCTCGAG
TTCGCGAAGC AGGCGCTCGA ACGGGGCGCG CGGAAGGTCT ACGCGGGCGC GCGCGATCCG
GCCAGCGTGA CGCTGCCGGG CGTCGTGCCC GTGAAGCTCG ACGTGACCGA TCCGGCGGCG
GTCGCCGCGG CGGCCGATGC GGCGCGCGAC GTCACGCTGC TGATCAACAA TGCCGGCATC
GCGCGGCTCG GCAGCCTGAC CGACGAGGGC GCCGTCGACG CATTGCGCGC GCACCTGGAG
ACCAACGTGT TCGGGATGCT GGCGATGTCG CGCGCGTTCG CGGGCACCCT CGCGGCCCAC
GGTGGCGGCG CGATCCTGAA CATCCTGTCG GTCGCGAGCT GGGTGAACCG GCCGATCCTG
TCGGGCTACG GCGTGTCGAA ATCGGCCGCA TGGGCGCTGA CCAACGGGCT GCGCCATTCG
CTGCGCGAGC AGCACACGCA GGTCGTCGGG CTGCATGCCG GTTTCATCGA TACCGACCTG
ACGGCCGGCC TCGACGTGCC GAAGGCCACG CCGGCCGACG TCGTGCGTCA GGCGTACGAC
GCCATCGAAG CGGGGGCGGA GGAAGTGTCG ACCGACGAGT TCACGCGGCA GGTGAAGGCC
ACGCTGTCGT CGGGCGTCTA TCTGGAAGAA CCGGCGCCGC GTTGA
|
|---|
| Protein sequence | MKIEGAVVFI TGANRGLGLE FAKQALERGA RKVYAGARDP ASVTLPGVVP VKLDVTDPAA
VAAAADAARD VTLLINNAGI ARLGSLTDEG AVDALRAHLE TNVFGMLAMS RAFAGTLAAH
GGGAILNILS VASWVNRPIL SGYGVSKSAA WALTNGLRHS LREQHTQVVG LHAGFIDTDL
TAGLDVPKAT PADVVRQAYD AIEAGAEEVS TDEFTRQVKA TLSSGVYLEE PAPR
|
|---|
| |