| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5440 |
|---|
| Symbol | |
|---|
| ID | 4451477 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | - |
|---|
| Start bp | 2540122 |
|---|
| End bp | 2541027 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639697501 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_839066 |
|---|
| Protein GI | 116693533 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.792139 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGTC AAACCTGGAT GTCGGCCGAT CTCAACTTAC TCAAGGCGTT CAGCGTTCTG
GTAGCAGAGC GCAGCGTTGT CAAGGCGGCA AAACGTCTGC ATCTGAGCGA ATCCGCCATG
AGCCGCACCC TGAGCCGAGT GCGCGACGCG TTCGGGGACC CTATCCTCAT CCGGGCCGGC
CGTTCGCTGA TTCCGACACC TCGTGCCTTG TCATTGCATC CCCGCGTACT CGACATGCTG
GCAATGGCGC AGGACATCCT CACGCGGGCC GAGCTCGTTG ACCCTGCATC GCTGACGCAA
ACCTTCACCA TCCGCTGTAA CGAGGGATTT GCGACGGAAT TCGGTGCGAA GCTACTCGAC
ATCGTCACTA CGGCAGCGCC GGGCGTTCAC CTGCGCTTTT CCATGCAGGA CGAGAAGGAC
GCCACCGCGC TGCGAGAGGA CAAGGCGGAT ATCGAAGTTG GGGTGCTTGG GAAAAGTGGA
CCGGAGATTC GTGTGCAGAC GCTACTGAGA GACCGTTTTG TCGGTGTGGT TGCGATGTCT
CACCCGCTTG CTGGCCATGA TCCGGTCAGT ATCGATGCAT ACACGCGATA CCCGCACGTG
AGCGTTTCGC GCAGGGGGCG TCGCGACGGC CCGATCGATG CTTTGCTGAG CGCGCTTGGC
GCAAAGCGCC GTGTTGCAAC GACGGTATCG AGTTTTCCGG TTGCGCTCGC GCTGGCGCAA
GGCGGCAGTA TTGTTGCAAA CGTGCCATTT CGTCAGACTG CGTCAGGTCG CATTGGCATG
CATACGTTCG AGCTGCCCGT CCAAACCGAG CCTGTCGTGG TCTCAATGAT GTGGCATCCG
AAGGTCGATC CGGACCCCGC ACACCGATGG CTGCGGGATT GCCTGCTGCA AACCTGTGCT
GATTAG
|
|---|
| Protein sequence | MKRQTWMSAD LNLLKAFSVL VAERSVVKAA KRLHLSESAM SRTLSRVRDA FGDPILIRAG
RSLIPTPRAL SLHPRVLDML AMAQDILTRA ELVDPASLTQ TFTIRCNEGF ATEFGAKLLD
IVTTAAPGVH LRFSMQDEKD ATALREDKAD IEVGVLGKSG PEIRVQTLLR DRFVGVVAMS
HPLAGHDPVS IDAYTRYPHV SVSRRGRRDG PIDALLSALG AKRRVATTVS SFPVALALAQ
GGSIVANVPF RQTASGRIGM HTFELPVQTE PVVVSMMWHP KVDPDPAHRW LRDCLLQTCA
D
|
|---|
| |