| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5423 |
|---|
| Symbol | |
|---|
| ID | 4451460 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | + |
|---|
| Start bp | 2521369 |
|---|
| End bp | 2522289 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639697484 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_839049 |
|---|
| Protein GI | 116693516 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0829573 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0352079 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGCA TCCGCAATCC CCTGAACATC GCGCAGCTCC AGGCATTCGT CTCCGCCGCG
CACCTGAAGA GCCTGCGCGC CGCCGCGCGG GAGCTCGGCG TCACGCAGCC GGCAATCACG
CACACGATCC GCGAGCTCGA AACGGCGCTC AACGCGGAAC TGCTCGTGCG CAGCGTGCGC
GGCGTCGAGC TGACCGCCTG CGGCGCGGCG CTGCTGCCGC GCGCCGAGCA GTTGCTCGGC
GACGTCCGCC GCACGGTCGA GGCCGTCGAG CAGGTGAAAG GCGAGATGTC GGGCCGCGTC
GCGGTCGGCA CGATGCCGTC GATCGCGCTG ACCGCGTTGC CGCACGCGGT GACGGCGTTT
CGCCAGTCAA TGCCGAACGT CAGCCTGCAT CTCGAGGAAA TGACGGTGCC GGACGCGCTC
GCGCAACTGC GCAACGGCAC GCTCGACATC GCTGCGATGC ACCATGTGCC CGCGCTCGAC
CGCGATTTCA CGCAATTGCC GCTGCTGTCG ACCGAATTCA CGATCGTGAT GCGCGACGGT
CATCCGCTCG CGCAGGCGCG CCGGTTAGAG GAATTGCTCG ACGCCGAGTG GATCGTCACC
GTCGGCGCCG AGCAGTTCCC GCACAGCGTG ATGGTCGGGA TGTTCGAGGC GCACGGGCTG
CCGCTGCCGA AACGTCTGCT GCGCTCGCCG ATGTCGTTCG CGGTGACGCT CGGGCTCGTC
GCGCGCTCGG ACGTGATCGG CTGCTTCACG CGCCCGCTCG CCGCGATGGT CGCGCCGCTC
GGCATTCGCA CGGCCGAACT CGACGAAAGC ATGCCGCGCT TCGACCTGTC GATCATCGCG
CGGCGCGACC TGCTGCCCAC GCCCGCCGTG TCGCACTTCG TCACGTGCCT GCAGCGCGCG
GTCAACGAAA CGCTCGGCTG A
|
|---|
| Protein sequence | MTRIRNPLNI AQLQAFVSAA HLKSLRAAAR ELGVTQPAIT HTIRELETAL NAELLVRSVR
GVELTACGAA LLPRAEQLLG DVRRTVEAVE QVKGEMSGRV AVGTMPSIAL TALPHAVTAF
RQSMPNVSLH LEEMTVPDAL AQLRNGTLDI AAMHHVPALD RDFTQLPLLS TEFTIVMRDG
HPLAQARRLE ELLDAEWIVT VGAEQFPHSV MVGMFEAHGL PLPKRLLRSP MSFAVTLGLV
ARSDVIGCFT RPLAAMVAPL GIRTAELDES MPRFDLSIIA RRDLLPTPAV SHFVTCLQRA
VNETLG
|
|---|
| |