Gene Bcen2424_5398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5398 
Symbol 
ID4451435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2497925 
End bp2498623 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content69% 
IMG OID639697459 
Productdimethylmenaquinone methyltransferase 
Protein accessionYP_839024 
Protein GI116693491 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0684] Demethylmenaquinone methyltransferase 
TIGRFAM ID[TIGR01935] RraA famliy 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00314819 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGCAAGC CATCCGTCAG CATTTCTCCG ATCAATCGCG ACATCGAACG CATCTCGCCG 
GAACTGGTTC AGGCGGCCGC GCGTTACCAG GCCGCGATCC TTGCCGACGT CGCGGGCCGC
CGCGGCACGG TGCATGGCCG CGTGCGGCCG CTGTCGCCGA AGATGAAGGT CGCCGGCCCC
GCAGTCACGG TCGAAGTCCG TCCGGGCGAC AACCTGGCGA TCCATGCGGC GCTCGCCGTC
GCGAAGCCGG GCGACGTCGT CGTGGTCGAC GGCAAGGGCG ACATCTCGTG CGCGCTGCTC
GGCGAAATCA TGGCGGCGCA GGCGAAGGCG AGCGGCATCG CCGGCATCGT CATCGACGGC
GCGGTGCGCG ACGCGCACGA ACTGGCCAAC GGCGACTACC CGATCTTCTC GGCCGGCCTC
AATCCGTGCG GTCCGACCAA AAGCATCGCG GGGCGCGTGA ATGCACCGAT CTCGCTGGGC
GGCGCGACGG TCAATCCGGG CGACCTGGTG GTCGGCGACG CAGACGGCGT CGTCGTCATT
CCCCGCGCCG ACGTCGCGCG CATCGTCGAT CTCGCGCAGA AAAAGCTGGA CTTCGAAACC
GCGCGTATCG CGGCGATCCA CAAGGGCGAC CTTCGTCCGG GCTGGATCGA GAAGGAGTTG
CGTGCAGCCG GCATGCTGGC CGAAGGCGAG GCACTGTGA
 
Protein sequence
MSKPSVSISP INRDIERISP ELVQAAARYQ AAILADVAGR RGTVHGRVRP LSPKMKVAGP 
AVTVEVRPGD NLAIHAALAV AKPGDVVVVD GKGDISCALL GEIMAAQAKA SGIAGIVIDG
AVRDAHELAN GDYPIFSAGL NPCGPTKSIA GRVNAPISLG GATVNPGDLV VGDADGVVVI
PRADVARIVD LAQKKLDFET ARIAAIHKGD LRPGWIEKEL RAAGMLAEGE AL