Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_5396 |
Symbol | |
ID | 4451433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | - |
Start bp | 2496015 |
End bp | 2496956 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639697457 |
Product | SMP-30/gluconolaconase/LRE domain-containing protein |
Protein accession | YP_839022 |
Protein GI | 116693489 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3386] Gluconolactonase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.003099 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGTTTTATC TGACGAGTCC CGACGTACGC GAAGCCGAAG TATTCACGCG CATGCCGGAG AAGTTTCGCA AGCCGGACGT CCGCACGGAA TGGGCGCGCG CGAATCGCGG CGGCATGGTC ACCGATTCCT TTCTCGAAGG GCCGGTCTGG GACCCGGACG GCTATCTGTT CGTCACCGAC ATTCCGCACG GGCGCATCTT CCGCATTTCG CCGTCGGGCG ACTGGGATCT CGTCGTCGAA TACGACGGCG AGCCCAACGG GATGAAGCGC TTCGACGCAT CGCACCTGAT CATCACCGAC TACCGGAACG GCCTGATGCT GCTCGATATC GAGCGCGGTG AAATTCGCCC GCATCTCGAG CGCCGCAACA CCGAGCGCTT CAAGGGCGTG AACGACCTGA CGTTCGACTC GGCCGGCAAC CTCTATTTCA CCGACCAGGG GCAGACCGGG CTGCACGATC CGACGGGCCG CGTGTATCGG CTGTCGCCCG ACGGCAAGCT CGACATGCTG CTCGGCACCT GCCCGAGCCC GAACGGGCTC GTCCTGTCGC GCGACGAGAA GGTGCTGTTC GTCGCGATGA CGCGCGGCAA TGCCGTGTGG CGCATGCCGT TGCAGGCCGA CGGGTCGGTC AGCAAGGTCA GCCAGTTCTT TACCTCCTAC GGACCGAGCG GGCCCGACGG CCTCACCGTC GATCTCGAAG GCCGCCTGTT CGTCGCGAAT CCGGGGCTCG GCCGCGTGTG GGTGCTCAAC CATTGCGCGG AGCCCGTCGA GATCCTGACC GGACCGAAAG GGGCGTCGCT CACGAGCGTG TGCTTCGGCG GCCCGGACAT GAAGACGCTT TTCATCACCG AATCGACGTC CGGTTCCGTC CTGAAAGCGG ACATGAGTAT TGCCGGCCCG CTGCCGAAAC AGGCAGCGAA ACGGGCAGTG AAGCAGGACT GA
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Protein sequence | MFYLTSPDVR EAEVFTRMPE KFRKPDVRTE WARANRGGMV TDSFLEGPVW DPDGYLFVTD IPHGRIFRIS PSGDWDLVVE YDGEPNGMKR FDASHLIITD YRNGLMLLDI ERGEIRPHLE RRNTERFKGV NDLTFDSAGN LYFTDQGQTG LHDPTGRVYR LSPDGKLDML LGTCPSPNGL VLSRDEKVLF VAMTRGNAVW RMPLQADGSV SKVSQFFTSY GPSGPDGLTV DLEGRLFVAN PGLGRVWVLN HCAEPVEILT GPKGASLTSV CFGGPDMKTL FITESTSGSV LKADMSIAGP LPKQAAKRAV KQD
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