Gene Bcen2424_5393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5393 
Symbol 
ID4451430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2492291 
End bp2493337 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content69% 
IMG OID639697454 
Productamidohydrolase 2 
Protein accessionYP_839019 
Protein GI116693486 
COG category[R] General function prediction only 
COG ID[COG3618] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00358895 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCAGACCG TTCACGCGCC CCATCTGCCG GTCAGGCCCG AGTGGCTCGC ATTGCGCGAC 
GAGCCGGTGC TCGAACCCGA ACTCGCCATC GTCGACGCCC ATCACCACCT GTGGGACCGC
CAGACCGGGC GCTATCTCGC GGACGAGTTC GGCGCGGACG TGCGCAGCGG GCATCGGGTC
GTGTCGACGG TCTACGTGCA GTGTCGATCG ATGTTGCGCG CAAGCGGGCC GGAGGCGTTC
AAGCCGGTGG GCGAAGTGGC ATTCGCGAGC GGCGTCGCCG CGATGTTCGA CAGCGGCGCA
TACGGCCCCA CGCGCTGTTG CGAGGCCATC GTCGGCGGCG CCGATCTGTC GCTCGGCGCG
GAACTCGAGG CGGTGCTCGA CACGATGCTG CAGGTGTCCG GCGGGCGATT GCGCGGCATC
CGCAATCCGC TCGCGTGGCA TGCGAGCCCC GACGTGCGGT CGAGCCCGGT GACGCCGCCG
CGCGACCGGA TGTCGGAGCA GGCTTTCAGG CAGGGCGTGG CGACGCTCGG CCGCTACGGA
CTGTCGCTCG ACGCGTGGGT CTATCACACG CAGCTCGACG ACCTGTACGA ACTCGTGCGC
GCGTCCGAGG ACGTCATCGT CGTCATCGAC CACTTTGGCG GCCCCGTCGG CGTGGGGCCG
CATGCCGGCC GGCGTGCCGA AGTGCATGCG CAGTGGAAAC GGCAGCTCGG GCGTCTCGCC
GCGCTGCCGA ACACGCGCAT GAAGCTCGGC GGCGCGGGCA TGACCGTGTT CGGTTTCGAT
TTCGCCGCGC GCGAGTTGCC GCCGTCGTCG CAGGACCTGG CGGCCGCGTG GCAGCCGTAT
TTCGACACCT GCGTCGAGCT TTTCGGCGTC GATCGCTGCA TGTTCGAAAG CAACTTCCCC
GTCGACAAGG GGATGTTCAG CTATCGCGTG CTGTGGAACG CCTTCAAACG ACTCGCGTCC
GCGATGTCGG CCGACGAAAA GGCCGCGCTG TTCAGCCGGA CGGCCGCCTC GACGTATCGC
GTCGCGATTC CCGGAGACAA CCCATGA
 
Protein sequence
MQTVHAPHLP VRPEWLALRD EPVLEPELAI VDAHHHLWDR QTGRYLADEF GADVRSGHRV 
VSTVYVQCRS MLRASGPEAF KPVGEVAFAS GVAAMFDSGA YGPTRCCEAI VGGADLSLGA
ELEAVLDTML QVSGGRLRGI RNPLAWHASP DVRSSPVTPP RDRMSEQAFR QGVATLGRYG
LSLDAWVYHT QLDDLYELVR ASEDVIVVID HFGGPVGVGP HAGRRAEVHA QWKRQLGRLA
ALPNTRMKLG GAGMTVFGFD FAARELPPSS QDLAAAWQPY FDTCVELFGV DRCMFESNFP
VDKGMFSYRV LWNAFKRLAS AMSADEKAAL FSRTAASTYR VAIPGDNP