Gene Bcen2424_5360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5360 
Symbol 
ID4451155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2453770 
End bp2455278 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content71% 
IMG OID639697421 
ProductGntR family transcriptional regulator 
Protein accessionYP_838986 
Protein GI116693453 
COG category[E] Amino acid transport and metabolism
[K] Transcription 
COG ID[COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.881059 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCGA GCGTGTTGTC GGACTGGCTG GCGCAGCGCC TCGTGCGCGG CGGCGAACAG 
CCGATCTACC GGCAGCTTCA CCGGCTGCTG CAACAGGCGA TCCTGTCGCG CGAACTGCCG
GCCGGCACGC GCGTGCCGTC GTCGCGGCTG CTGGCCGCCG AGCTCGGGAT CGCGCGCAAC
ACGGTCACGC AGGTTTACGA ACAGCTTGCG CTCGAAGGCT ATGTGAACTC GGCGACGGGG
CGCGGCACGT TCGTCGCCGA CAGCGCGCCG GACGAGATCG TCGGCGCGCC GCCCGACGCG
GGCGCAGGCC CGGCCGTCGT GACGCCGTCC GTGCGGCGGC TGTCCGCGCG CGGTACGCGG
CTCGTCGAAG GCGCCGGCGT GTCGAAGCGC CAGGGCGGCG CGTTCATGCC GGGCGTGCCC
GATGTGTCGC GCTTTCCGGC GCGCGTGTGG ACGCGGCTGC ACAACAAGTA CTGGCGGCGC
CTGCGCCCGG ACCTGCTGAC CTACGCGCCC GGCGGCGGGC TCGCGCTGCT GCGCGAGGCG
CTGGCCGACT ACCTGCGCAC GTCGCGCTCC GTGCGCTGCA CGCCCGAGCA GATCGTGATC
ACGACCGGCA TCCACCAGTC GATCGACCTC GCGGTGCGGC TGCTGACCGA TCCGGGCGAC
GCGATCTGGA CCGAGGACCC GTGCTACTGG GGCGTGCGCA GCGTGCTGAA CGTGTCGGGG
CTGACCACCC GGCCGATTCC GGTCGACGAC GAAGGGATCG CGCCGTCGGC CGCCGATCTG
GCCGAGCCGC CGAAGCTGAT GCTCGTTACG CCGTCGCACC AGTATCCGCT CGGGATGGTG
ATGAGCCTCG CGCGGCGGCG GATGCTGCTC GAATACGCGC GCCAGCACGG CTGCTGGATC
ATCGAGGACG ATTACGACAG CGAATTCCGC TACGGCAGCC GGCCGCTCGC GTCGCTGCAG
GGCCTCGACA CGGCCGGGCA GGTGATCTAC GTGGGCAGTT TCGGCAAGAC GCTGTTCCCG
GGGCTGCGGG TCGGCTATCT GGTCGCGCCG GAGCCGCTCG CGGAAAGCTT CGCGACCGCG
AGCGCCGAGC TGTATCGCGA AGGGCAGTTG CTGCAGCAGG CCGTGCTCGC CGAATTCATC
GCGGAAGGGC ATTTCGTGTC GCACATCCGC AAGATGCGCA CGCTGTACGG GCAACGCCGC
GAGGTGCTGC TCGAGGCGGT CGCGCGGCGC TACGGCGATA CGCTGCACGC GCTCGGCAGC
GACGCCGGGC TGCATCTCGT CACGCAATTG CCGGCGGGCG TCGACGATCG CGCGGTCGCG
CAGGCCGCGC TGGCGCGCAA CATCGTCGTG CGGCCGCTGT CCGGGTATTA CGCGGACCGC
TCGCGGGCTG CCTCGGGGTT GCTGCTCGGT TATGCGTGCG TGCCGGAAGA CGAGATAGCG
ACCGCGTTCG CGACGCTTGC CGAGGCGATC GACGAGCGGG CGTTCGGCGG GGCCGTTGCG
GTGGCTTGA
 
Protein sequence
MRASVLSDWL AQRLVRGGEQ PIYRQLHRLL QQAILSRELP AGTRVPSSRL LAAELGIARN 
TVTQVYEQLA LEGYVNSATG RGTFVADSAP DEIVGAPPDA GAGPAVVTPS VRRLSARGTR
LVEGAGVSKR QGGAFMPGVP DVSRFPARVW TRLHNKYWRR LRPDLLTYAP GGGLALLREA
LADYLRTSRS VRCTPEQIVI TTGIHQSIDL AVRLLTDPGD AIWTEDPCYW GVRSVLNVSG
LTTRPIPVDD EGIAPSAADL AEPPKLMLVT PSHQYPLGMV MSLARRRMLL EYARQHGCWI
IEDDYDSEFR YGSRPLASLQ GLDTAGQVIY VGSFGKTLFP GLRVGYLVAP EPLAESFATA
SAELYREGQL LQQAVLAEFI AEGHFVSHIR KMRTLYGQRR EVLLEAVARR YGDTLHALGS
DAGLHLVTQL PAGVDDRAVA QAALARNIVV RPLSGYYADR SRAASGLLLG YACVPEDEIA
TAFATLAEAI DERAFGGAVA VA