Gene Bcen2424_5310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5310 
Symbol 
ID4453320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2399305 
End bp2400681 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content66% 
IMG OID639697371 
Productmajor facilitator transporter 
Protein accessionYP_838936 
Protein GI116693403 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2223] Nitrate/nitrite transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.197637 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAAAA GCGGGCCCTG GAGACGCAGC ACCAACAACT ACATTCGAAA ACCGATCGTC 
CTGACCATGC AAGCTTCCGA ATTGAGCGGC GTGCCTCGCG CCGCCGAACG CGCGCTCACG
CGCAGCGACT ACAAGACCCT TGGCCTTGCC GCACTCGGCG GCGCCCTCGA GTTCTACGAC
TTCATCATCT TCGTGTTCTT CGCGCCGGCG ATAGGGCAGC TGTTCTTCCC GCACGACATT
CCCGACTGGC TTCGCCAGTT GCAGACGTTC GGCATCTTCG CGGCCGGCTA TCTCGCGCGC
CCGCTCGGCG GCGTGATCAT GGCCCACTTC GGCGACCTGT TCGGCCGCAA GCGGATGTTC
ACGCTGAGCG TGCTGATGAT GTCGGTGCCG ACGCTGCTGA TGGGCCTCCT GCCGACCTAC
GACACGATCG GCATCCTCGC GCCGGTGTTG CTGCTGCTGT TCCGCGTGCT GCAGGGCGCG
GCGGTCGGCG GCGAAGTGCC GGGAGCATGG GTGTTCGTGT CCGAGCACGT GCCGTCGCGC
CATATCGGCT ACGCATGCGG CACGCTGACC GCGGGCCTCA CGGCCGGCAT CCTGCTCGGC
TCGCTCGTCG CGGCCGGCAT CAACAGCCGC TACTCGGCGG CCGAAGTCGG CGCATTCGCA
TGGCGCATTC CGTTCCTGCT CGGCGGCGTG CTCGGGCTGT TCTCCGTGTA CCTGCGCCGC
TGGCTGCATG AAACGCCGGT GTTCGCCGAG ATGAAGGCGA AGAAGGCGCT CGCGGCCGAG
ATTCCGCTGA AGGCGGTGCT GCGCGACCAT GGCCGCGCGG TAATCGTGTC GATGCTGCTC
ACGTGGATGC TGTCGGCCGC GATCGTCGTC GTGATCCTGA TGACGCCCGC GCTGCTGCAG
AAGCAGTTCC ACCTGACGCC CGCGACGACG CTGTTCGCGA ACAGCATCGC GACGCTGTGC
CTGACGGCCG GCTGCATCAC TGCCGGCTCG CTCGCGGGCT GGATCGGCGC GAAGCGCGTG
CTCGCCATCG GCGGCATCGG GCTGGCCGCA TGCTACTACC TGTTGTTCGT GCAGGTCGCG
GCCGATGCGT CGACGCTGCC GCTCTACTAC GGGATCGCGG GCTTCATGGT CGGCACGATC
GGCGCGGTGC CGTTCGTGAT GGTGAAGAGC TTCCCGGCCG TCGTGCGCTT CTCGGGCATC
TCGTTCTCGT ACAACGTCGC GTATGCGATC TTCGGCGGCC TCACGCCGGT GATCGTGTCG
CTGATGATGA AGTCGAATCC GCTCGCGCCG GTCGTGTACG TCGCGGCGAT CTGCGTGCTC
GGCGCGATCG CCGTGCAGTT CTCGAAGGAT GCGAAGGATG TGAAGGGCAC CCACTGA
 
Protein sequence
MPKSGPWRRS TNNYIRKPIV LTMQASELSG VPRAAERALT RSDYKTLGLA ALGGALEFYD 
FIIFVFFAPA IGQLFFPHDI PDWLRQLQTF GIFAAGYLAR PLGGVIMAHF GDLFGRKRMF
TLSVLMMSVP TLLMGLLPTY DTIGILAPVL LLLFRVLQGA AVGGEVPGAW VFVSEHVPSR
HIGYACGTLT AGLTAGILLG SLVAAGINSR YSAAEVGAFA WRIPFLLGGV LGLFSVYLRR
WLHETPVFAE MKAKKALAAE IPLKAVLRDH GRAVIVSMLL TWMLSAAIVV VILMTPALLQ
KQFHLTPATT LFANSIATLC LTAGCITAGS LAGWIGAKRV LAIGGIGLAA CYYLLFVQVA
ADASTLPLYY GIAGFMVGTI GAVPFVMVKS FPAVVRFSGI SFSYNVAYAI FGGLTPVIVS
LMMKSNPLAP VVYVAAICVL GAIAVQFSKD AKDVKGTH