| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5302 |
|---|
| Symbol | |
|---|
| ID | 4453312 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | - |
|---|
| Start bp | 2391034 |
|---|
| End bp | 2392377 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639697363 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_838928 |
|---|
| Protein GI | 116693395 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | [TIGR00893] d-galactonate transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0397633 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCACA CCACCCACAC GAGCGCCGCG CCGGCGCAGG CGGCCGGCAC GGTCCGGCGC
ACGTCGGCGC GCTACAAGAT CCTCGCGCTG CTCGCGATCG GCACGATGAT CAACTATCTC
GACCGCACCG TGCTGGGCGT GGCTGCGCCG CAGCTCACCA AGGAGCTCGG CATCAATGCG
GCCGTGATGG GCATCATGTT CTCCGCGTTT TCGTGGACGT ACGTGGCGAT GCAGGTGCCC
GGCGGCCTGT TCCTCGACCG CTTCGGCAGC AAGGTCACCT ATTACTGGTC GATGACGCTG
TGGTCGCTGT GCACGTTCCT CCAAGGCTTC GTGCCGGGTG TCGCGACGCT GCTCGCGTGC
CGGCTCGGTC TCGGTGTGAC GGAAGCGCCG TGCTTCCCGA CCAACAGCCG CGTCGTCGCG
ACGTGGTTCC CGCAGAACGA ACGCGCGATG GCGACGGGTA CCTATACCGT CGGCGAATAC
ATCGGCCTCG CGTTCTTCAG CCCGGTGCTG TTCGCGCTGA TGGGCGCGTT CGGGTGGCGC
TCGCTGTTCT GGGTCGTGGG CGCGGTCGGC ATTGCGTTCG GCCTGATCTG GTGGAAGTTC
TACCACGAGC CGCGCAACCA TCCGGGCGCG AACGCCGAGG AACTCGCGTA CATCGAAGCG
GGCGGCGGTC TCGTTCACGG TGCGCGCAAG AGCGGCGACA AGGGCGACAA GCCGGCGCAG
GCCCAGTTCA GCTGGTCGAT GGTCGGCCAG CTGGTGAAGA AGCGCCAGCT CGCCGGCATC
TGCCTCGGCC AGTTCGCCGG CAACTCGACG CTCGTGTTCT TCCTGACCTG GTTCCCGACC
TATCTGGCAA CCGAACGCCA CATGGGCTGG CTGAAGATCG GTTTCTTCGC GGTGATGCCG
TTCATCGCCG CGTCGGTCGG CGTGATGTTC GGAGGGATCT TCTCCGACTG GCTGCTGCGC
CGCGGCAAGT CCGCGAACCT CGCACGCAAG CTGCCGATCA TCGCGGGCCT GCTGCTCGCG
TCGACGATCA TTCTCGCGAA CTACGTGCAG AGCAACGAAG CGGTGATCGC GATCATGTCG
GTCGCATTCT TCGCGCAGGG CATGGCCGCA CTCGGCTGGA CGCTCGTGTC GGACATCGCG
CCGGACGGCC TGCTCGGCGT GACGGGCGGC ATCTTCAACT TCGCGGCGAA CCTCGCCGGC
ATCATCACGC CGCTCGTCGT CGGCTTCATC GTCGCGTCGA CCGGCTCGTT CGTCGGCGCG
CTCGTGTTCA TCGGCGTGAT CGCGCTGGTC GGCGCGCTGT CGTATATCTT CGTCGTCGGC
GACATCAAGC GGATCGAGCT GTAA
|
|---|
| Protein sequence | MQHTTHTSAA PAQAAGTVRR TSARYKILAL LAIGTMINYL DRTVLGVAAP QLTKELGINA
AVMGIMFSAF SWTYVAMQVP GGLFLDRFGS KVTYYWSMTL WSLCTFLQGF VPGVATLLAC
RLGLGVTEAP CFPTNSRVVA TWFPQNERAM ATGTYTVGEY IGLAFFSPVL FALMGAFGWR
SLFWVVGAVG IAFGLIWWKF YHEPRNHPGA NAEELAYIEA GGGLVHGARK SGDKGDKPAQ
AQFSWSMVGQ LVKKRQLAGI CLGQFAGNST LVFFLTWFPT YLATERHMGW LKIGFFAVMP
FIAASVGVMF GGIFSDWLLR RGKSANLARK LPIIAGLLLA STIILANYVQ SNEAVIAIMS
VAFFAQGMAA LGWTLVSDIA PDGLLGVTGG IFNFAANLAG IITPLVVGFI VASTGSFVGA
LVFIGVIALV GALSYIFVVG DIKRIEL
|
|---|
| |