Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_5171 |
Symbol | |
ID | 4452940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | - |
Start bp | 2218033 |
End bp | 2218929 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639697227 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_838797 |
Protein GI | 116693264 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4176] ABC-type proline/glycine betaine transport system, permease component |
TIGRFAM ID | [TIGR03416] choline ABC transporter, permease protein |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00870989 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.647601 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGAAA TGATTCCGCT CGGTACCTGG GTCGACCAGT CCGTTCACTA CCTGCTCGAC CACGACGCGA AGACGTTCGA CGCGATCGGT CAAGCGATCG AAGGGCTCGC GGCATTCGTC GAGCATGGCC TGCAGGCGAT CCCGATGTGG CTGATGATGG CGATCTTCAT CGGCGTCGGG CTGTGGCGGG TGGGCTGGCG CTTCGCGCTG TTCACCACGC TGTCGCTGCT GCTGATCTTC GCGACGGGCT TCTGGGATCA GACGGTCATC ACGCTCGGCC TCACGCTGTC GTCGACGATC ATCAGCCTCG TGCTCGGCAT CCCGCTCGGC ATCTGGGCCG CGAAGAGCAA GTGGGTCGCC GCGATCGTGC GCCCGATCCT CGACCTGATG CAGACGATGC CCGCGTTCGT CTACCTGATT CCGGCCGCGA TGCTGTTCGG TCTCGGCCGC GTGCCGGGGA TCCTGTCGAC GGTGATCTTC GCGATGCCGC CCGCGGTGCG TCTCACGAGC CTCGGCATCC GTCACGTGAA CCGCGAGATC GTCGAAGCCG GCCAGGCGTT CGGCTGCACG CCGTGGCAGT TGCTGTACAA GGTGCAGTTC CCGAACGCGC TGCCGTCGAT CATGCAGGGC GTGAACCAGA CGATCATGAT GGCGCTGTCG ATGGTGATCA TCGCGTCGAT GGTCGGCGCG GGCGGCCTCG GCAACGACGT GCTCGCGAGT ATCCAGCGCC TCGACATCGG TCTCGGCTTC GAAAGCGGTC TGTCGGTCGT GCTGCTCGCG ATCATTCTCG ACCGCATCAC CGAGAGCTTC GGCCGCGCGC CGGGCACCGC GAAGGCGCCG CTGTTCTCGG GCCTCAAGCA GCTGTTCCGC GTGAAGGCCG CGCCCGCGCA GGCCTGA
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Protein sequence | MSEMIPLGTW VDQSVHYLLD HDAKTFDAIG QAIEGLAAFV EHGLQAIPMW LMMAIFIGVG LWRVGWRFAL FTTLSLLLIF ATGFWDQTVI TLGLTLSSTI ISLVLGIPLG IWAAKSKWVA AIVRPILDLM QTMPAFVYLI PAAMLFGLGR VPGILSTVIF AMPPAVRLTS LGIRHVNREI VEAGQAFGCT PWQLLYKVQF PNALPSIMQG VNQTIMMALS MVIIASMVGA GGLGNDVLAS IQRLDIGLGF ESGLSVVLLA IILDRITESF GRAPGTAKAP LFSGLKQLFR VKAAPAQA
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