| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5169 |
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| Symbol | |
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| ID | 4452938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | - |
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| Start bp | 2215877 |
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| End bp | 2216773 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639697225 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_838795 |
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| Protein GI | 116693262 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR03414] choline ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.234751 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.931237 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGCCG TTTATGCGGC CGATCCGCCC GTGTGCAAGA ACGTGCGCTT CGCGGATGTC
GGCTGGTCCG ACATCGCGGC GACCACGGGC CTCGCGTCGA CGATGCTGCA GGGGCTCGGC
TACAACCCGA CGAAGACGAT CGCCTCGGTG CCGATCACGT TCGCGGGGAT CAAGAGCAAG
CAGATCGATG TGTTCCTCGG CTACTGGTCG CCGACGATGG ACCCGATCAT CCAGCCGTTC
ACGAAGGCCG GCACGATCAA GGTGCTCGCG ACGCCGAACC TGACCGGCGC GAAATACACG
CTCGCGGTGC CCGACTACGT GTACCAGGGC GGCCTGAAGT CGTTCGCGGA CATCCAGAAG
TACGCGGACA AGCTGAACGG CAAGATCTAC GGGATCGAGC CGGGCAACGA CGGCAATGCG
CTGATCAAGA AGATGATCGA CGGCAACCAG TTCGGCCTCG GCAAGTTCAA GCTGGTCGAG
TCGAGCGAGG CCGGGATGCT GGTCGAAGTG AATCGCGCGG CCCGCGACAA GCAGTGGATC
GTGTTCCTTG GGTGGGAACC GCATCCGATG AACGTGCAGA TGAAGATCGA CTACCTGACC
GGCGGCGACG ATGTGTTCGG CCCGAACTAC GGCGAAGCGA AGGTGCTGAC CGCAACCCCG
CCCGATTACG CGCAACGCTG CCCGAACGTC GCGAAGTTCG TGTCGAACCT GCAGTTCACG
ACGTCGATCG AGAACCACGT GATGGTGCCG ATCATGAACA AGCAGGACCC GAACAAGGCC
GCCGCCGACT GGCTGAAGGC GAACCCGCAA GCGCTCGACA AGTGGCTGGC CGGCGTGACG
ACGCTCGACG GCAAGCCCGG CCTGCCGGCG GTGAAGGCGT ACCTCGGCGT GCATTGA
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| Protein sequence | MSAVYAADPP VCKNVRFADV GWSDIAATTG LASTMLQGLG YNPTKTIASV PITFAGIKSK
QIDVFLGYWS PTMDPIIQPF TKAGTIKVLA TPNLTGAKYT LAVPDYVYQG GLKSFADIQK
YADKLNGKIY GIEPGNDGNA LIKKMIDGNQ FGLGKFKLVE SSEAGMLVEV NRAARDKQWI
VFLGWEPHPM NVQMKIDYLT GGDDVFGPNY GEAKVLTATP PDYAQRCPNV AKFVSNLQFT
TSIENHVMVP IMNKQDPNKA AADWLKANPQ ALDKWLAGVT TLDGKPGLPA VKAYLGVH
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