| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5045 |
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| Symbol | |
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| ID | 4452305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | + |
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| Start bp | 2070694 |
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| End bp | 2071680 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639697102 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_838672 |
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| Protein GI | 116693139 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.373197 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATGCAT GGAGCGCGCG CCACGTCCCG GCGCAAGGCG GCAAGGTCGC GGTCGTGACC
GGCGCCAATA GCGGCCTCGG CTGGCACCTC GCGGAAACGC TGGCCGCGAA AGGCGCGACG
GTCGTGATGG GCTGCCGCGA CGCCACCCGC AGCGCGCAGG CCGCCGACGC GATCCGCCGG
CTTCATCCTC ATGCACGCGT CGAAGTCGAT CCGCTCGACC TCGCCGATCT CGCGTCGATC
GCACGCTTCG CGGCCGACGT CGGCGAACGC CACGGCCGCG TCGACATCCT CTGCAACAAC
GCCGGCGTGA TGTTCCTGCC GCTGCGGCAC ACGCGCGACG GCTTCGAGAT GCAGTTCGGC
ACCAACCACC TCGGCCATTT CGCGCTGACC GGCCATCTGC TGCCGGCGCT GCGCGCCGCA
CGTCGGGCGC GCGTCGTCAC GATGTCGAGC GGCTTCAACC GAGGCGGCCG GATTCGCGTG
GACGACCTGC GCGCCGCGCA TCGCTACAAC CGTTATCTCG CCTATTGCGA CAGCAAGCTC
GCGAACCTCG TGTTCGCGCT CGAGCTGCAG CGCCGCTTCG AGCGCGCGGC GTTCGCCGGC
ATCAGCGTCG CCGCGCACCC CGGCTATGCG GCGACCAACC TGCAGTTCGC GGGCCCGGCA
ATGGACCGCT CGCCCACCCG CGCCGCGCTG ATGCGTGCCG CGAACCGTTA TCTCGCGCAG
CCGGCCGATC AGGGCGCGCT GCCCGCGATT CATGCGGCCA CGTCGCCCGA TCTGGCCGGC
GGCGCGTACA TCGGCCCGTC CGGCTGGTTC GAATCGCGGG GGCTGCCGGC ACCGGCAAGC
GTGCCGCGCG CGGCGCGCAA CGTGGCAACG GCGGCGTTGC TGTGGGAAGC CTCGGAAGCC
GCGACGGGCG TGCGCTTTCT CAGTTCCGGC GCACCCGCGG GCCGCGCGTC GGGCCGGCCG
TTCGATACGG CGGCCGAAGC ACGCTGA
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| Protein sequence | MHAWSARHVP AQGGKVAVVT GANSGLGWHL AETLAAKGAT VVMGCRDATR SAQAADAIRR
LHPHARVEVD PLDLADLASI ARFAADVGER HGRVDILCNN AGVMFLPLRH TRDGFEMQFG
TNHLGHFALT GHLLPALRAA RRARVVTMSS GFNRGGRIRV DDLRAAHRYN RYLAYCDSKL
ANLVFALELQ RRFERAAFAG ISVAAHPGYA ATNLQFAGPA MDRSPTRAAL MRAANRYLAQ
PADQGALPAI HAATSPDLAG GAYIGPSGWF ESRGLPAPAS VPRAARNVAT AALLWEASEA
ATGVRFLSSG APAGRASGRP FDTAAEAR
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