Gene Bcen2424_5035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5035 
Symbol 
ID4452243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2060288 
End bp2061055 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content68% 
IMG OID639697092 
Productregulatory protein GntR, HTH 
Protein accessionYP_838662 
Protein GI116693129 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.87866 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.851882 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATCC AGCCGATTCA GAACCGCCGC CTCTACCAGC AGATCGCCGA CAAGCTCAGT 
GCGATGATCG AGTCCGGCGA TTTCCCGCCG GGCAGCTATC TGCCGCCCGA GCGCGAACTC
GCCGAACGGT TCGGCGTGTC GCGCACGTCG GTGCGCGAGG CGCTGATCGC GCTCGAAGTG
AACGGACTCG TCAGCGTGCG TGTCGGCGAC GGCGTGAAGG TGCGCCATCC CGAAGCGGCC
GCGGCGCCCG AACCCGCGCC GGCTCCCGAC GCGACGGTCG CGCCGTTCTC GATCGTCGAG
ATCGATCCCG AGCTCGGCAT CGCACTCGAT CTCGACACCG AAATCCCGCC GTTCGCGCTG
CTGCAGGCGC GCCGGCTGAT CGAGCCGGAA GCCGCGTCGC TGGCCGCGAA GCACGGCTCG
GACGCGCAGA TCGAAGGCAT CCACGAAGCG TTCCTGCGCA ACCAGGACGA CAACCGCAGC
GGCTCGCTCA CGCACCCGGG CGACCGGCTG TTCCATATCC GCATCGCGGA GGCGAGCGAC
AACGCCGCGT ATGCGCTGAT GATCAAGCAG TTGCTCGCGC ACAAGTACGA CCTGATGTTC
CAGCGGCTGC AGTCGCTGTA CATGCCGAAC GACATGCCGC ACCGGTCGGA GCTCGAGCAT
CGCGCGATCC TCGATGCGAT CCGTGCGCGC GATCCCGACG CCGCGCGCCG TGCGATGGCC
GAGCATCTCG ATGAAGTGAT TCGCATCTTC GGCCGCGCGC TCGACTGA
 
Protein sequence
MSIQPIQNRR LYQQIADKLS AMIESGDFPP GSYLPPEREL AERFGVSRTS VREALIALEV 
NGLVSVRVGD GVKVRHPEAA AAPEPAPAPD ATVAPFSIVE IDPELGIALD LDTEIPPFAL
LQARRLIEPE AASLAAKHGS DAQIEGIHEA FLRNQDDNRS GSLTHPGDRL FHIRIAEASD
NAAYALMIKQ LLAHKYDLMF QRLQSLYMPN DMPHRSELEH RAILDAIRAR DPDAARRAMA
EHLDEVIRIF GRALD