| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_4744 |
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| Symbol | |
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| ID | 4453553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | - |
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| Start bp | 1725563 |
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| End bp | 1727074 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639696800 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_838371 |
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| Protein GI | 116692838 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.918566 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00837312 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCGCCG CTTTCCGTCT TTCCGCGCTC GCGATGTCGG TGACGCTCGC CGCATGCGCG
GTGGGCCCCG ATTTCAAACG GCCCGATACC GCCACGGCCG CCCGGTTCGC GCGCGATGTT
CGTCCGGCCA CGCAGCGTGA CGCGGCGCCG GCCGATACAC GAACCGACAC GTCGCCCGAC
GCCGATGCCG CCTTCTGGCG CGGGTTCGGC GATCCGACGC TGACACGGTT GATCGATGCG
GCGCTCGCCG CGAACCAGGA CTTGCAGGTC GCCGTATCGC GCTACGACGC GTCGAATGCG
CTGCTGTCGC AGGCCACGTT CGACCGCTAT CCGACGATCA CCGCGAGCGG CCAGATCGGC
CATCAGCTGA TGAGCAAGGA CCAGGCGTTC GGCGCGCCGC GCAGCCAGCG CGATACGCCG
ACGTCCAATG TCGGGATCAA TGCCGCGTGG GAGCTCGACC TGTTTGGCCG CGTGCGCCGC
TCGATCGAGT CGCAGCGTGC GGAAACGGCG GCCAGCGCGG CCGACGTGCG TGCGGTGCGC
GTCGCGATCG CGGGGGAGGT CGCCAGCACG TACGTCGATC TGCGCGGCTC GCAGGAGCGG
TTGCGGATCG CCCGCGAGAA CGCCGACAAC CAGAAGCAGA CGCTCGCGCT GATCAATGCG
CGCGTCGGCG CGGGGCGAGG CTCCGAACTG GATGCGGCGC GAGCGCGAGC GCAGTACGAA
TCGACGACGT CGCGGATCGC CGTGTACGAA GCCGCGATCG GCGTCGACGA GCATCGGCTC
GCGGTGCTGA CCGGACAGAC GCCGGATGCG CTGATCGGCC GGTTCGACTT ACCGAAGACG
GGCACGCCGA CAGGCACGCC GGTGCCGCTG CCGGCGCTCG CGGCCGACAT CGATCCCGGC
ACGCCGGGCG ACCTGCTGCG CCGCCGCCCC GATGTCGCGG CCGCCGAGGC GCGGCTGCAC
GCGGCGACCG CGCGCGTCGG CGTCGCGACC GCCGACCTGT TCCCGCGCTT CACGCTGTCG
GGGCTGCTCG GTAGCGCGAC GAGCAGCTAC GGGTTTTTCC GCGCCGGCAG TGATACCAAC
CTGATCGCGC TCGGCATCGA CTGGTCGTTC CTCGATGTCG GCCGCGTGCG TGCGCGGATC
GCCGCGAGCG ACGCGGAAGC GGCCGGCCAG CTTGCACAGT ATCGGCAGAC CGTGCTCGGC
GCGCTGGAGG AAACCGAGAA CGCGTTGCTG CGTGTCGCCC GCACGCGTGA CGAGACCGCG
CACCTCGTGC GTGCGGCCGA CGACAGCGCA CGCGCGGCGC AGCTCGCGCA GGCGCGTTTC
TCGGCCGGCG CGATCGACTA CTACGAAGTG CTCGACGCGC AGCGGACGCT GCTGCAGGCA
CAGGATGCGG CGGCCGACGG GCGGATGCGC AGCGCCGCAT CGACGGTCGC GCTGTACAAG
GCGCTCGCGG GCGGCTGGCC GTCGGGCACG GAGCGGGGCA CGCCAGGTCC GCTCGCTCGG
TCGGGGCAGT AG
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| Protein sequence | MSAAFRLSAL AMSVTLAACA VGPDFKRPDT ATAARFARDV RPATQRDAAP ADTRTDTSPD
ADAAFWRGFG DPTLTRLIDA ALAANQDLQV AVSRYDASNA LLSQATFDRY PTITASGQIG
HQLMSKDQAF GAPRSQRDTP TSNVGINAAW ELDLFGRVRR SIESQRAETA ASAADVRAVR
VAIAGEVAST YVDLRGSQER LRIARENADN QKQTLALINA RVGAGRGSEL DAARARAQYE
STTSRIAVYE AAIGVDEHRL AVLTGQTPDA LIGRFDLPKT GTPTGTPVPL PALAADIDPG
TPGDLLRRRP DVAAAEARLH AATARVGVAT ADLFPRFTLS GLLGSATSSY GFFRAGSDTN
LIALGIDWSF LDVGRVRARI AASDAEAAGQ LAQYRQTVLG ALEETENALL RVARTRDETA
HLVRAADDSA RAAQLAQARF SAGAIDYYEV LDAQRTLLQA QDAAADGRMR SAASTVALYK
ALAGGWPSGT ERGTPGPLAR SGQ
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