Gene Bcen2424_4712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_4712 
Symbol 
ID4453189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp1697512 
End bp1698591 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content64% 
IMG OID639696768 
Productporin 
Protein accessionYP_838339 
Protein GI116692806 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.875326 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.163784 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAAGC ATGCGGTAGT AGCAGCAGTC ATCGGGATGG GCGTCGCGTC GGGCGCGTGG 
GCGCAGAGCA GCGTGGTGCT GTACGGCAGC ATGGATGCGG GCGTCGCATA CGTGAACAAC
GTCGGCGGCC ACGCGAAGTG GGCGATGATC CAGGGCAATA CGCAGCCCGA CCGGTGGGGC
CTGAAGGGCA AGGAAGATCT CGGCGACGGA CTGTCGGCGA TCTTCCAGCT GGAAAACGGC
TTCTATACGA ACAACGGCCA GTTCGCGACG GCGAACACGA TCTGGAACCG CGCGGCGTTC
GTCGGCCTCA GCGCCGAGCG CTACGGCACA CTGACGCTCG GCCGCCAGAC GCCGCTGTCG
TTCGACTATC TCGATCCGCT CAGCACCGCG TATCTCGCGC TGAGCTGGTA TGCGTTCCAT
CCCGGCAACA TCGACGGGCT CGCCGCGACC GGCAACGTGC CGTACAACAA TTCGATCAAG
TACCGTTCGC CGACCTTCGC GGGTTTCTCG GCCGCGGCGA CGCTCGCGCT CGGCAACACG
ACGAACTTCT CGACCGGCAA ATCGGTCGGC GTCGCGCTGA ACTATGCGAA CGGGCCGTTC
AAGGCGTCGG CCGTCTACTC GAACGAGCAC GACCGCTCGA TCCTGATCAG CCAGACGGGC
ATCACGTCGT TCCAGGGGCA AAACACCGCG AATGGTTATC TCGCCAGCAA GGTCGAGAAC
ATCGGCGCGG GTGCGTCGTA CCAGATCGGC GACTTCCTCG TGCATGGCCT CTACACGCGC
GTGAAGATGC AGTCGAACGG GTTTTCCGAC ACGTTCCAGA GCTACGACGC GGGCGTGAAC
TACCGCAGCA GCGCGTTCAA CACGATCGCG GGCGGTGCGG CGACCACGAC GCTGGCCGGC
CGCCGCTGGA CGCAGGTCGA ACTCGGCGAC ATCTACGCGT TGTCGAAGCG CACGCAGCTG
TATGCGAACG TGCTTTATGA ACACGGCTCG GGCGGCGCGA AGGCCGCGTT CTTCACGGCC
GGCGTGTCGA GCACCGCGAA CCAGGTGATC GTGCTGACCG GCATTCATCA CTCGTTCTGA
 
Protein sequence
MVKHAVVAAV IGMGVASGAW AQSSVVLYGS MDAGVAYVNN VGGHAKWAMI QGNTQPDRWG 
LKGKEDLGDG LSAIFQLENG FYTNNGQFAT ANTIWNRAAF VGLSAERYGT LTLGRQTPLS
FDYLDPLSTA YLALSWYAFH PGNIDGLAAT GNVPYNNSIK YRSPTFAGFS AAATLALGNT
TNFSTGKSVG VALNYANGPF KASAVYSNEH DRSILISQTG ITSFQGQNTA NGYLASKVEN
IGAGASYQIG DFLVHGLYTR VKMQSNGFSD TFQSYDAGVN YRSSAFNTIA GGAATTTLAG
RRWTQVELGD IYALSKRTQL YANVLYEHGS GGAKAAFFTA GVSSTANQVI VLTGIHHSF