Gene Bcen2424_4680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_4680 
Symbol 
ID4451384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp1664716 
End bp1665489 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content69% 
IMG OID639696736 
Productaldolase II superfamily protein 
Protein accessionYP_838307 
Protein GI116692774 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0426137 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTCG CATACCGTCC TGATGCCGTG AAGCCCGGCG GCCCGATCTC GGACGCCGAA 
CGCAAGCTGC GGGTCGACCT CGCGGCCGCG TACCGGCTCG TCGCGCTGAA CGGCTGGGAC
GACCTGATCT ACACGCATTT GTCCGCGACC GTGCCGGGCG AACCCGGCCA CTTCCTGATC
AATCCGTTCG GCCTCACGTT CGACGAGGTT CGCGCGTCGA ACCTCGTGAA GATCGACCTG
GCCGGCAACC GGATCGGCGC CAGCGAGCAC GCGGTCAACG TGACCGGCTT CGCACTGCAT
GCGGCCGTGC ACGCCGCACG CGCCGACGCG GTCTGCGTGA TGCACCTGCA CAATACGGCC
GGCATCGCCG TGTCGATCCA GCGCGACGGG CTGCTGCCGG CGTCGCAGCA TGCGCTGCGC
TTTCATGGCG ACCTCGCGTA CCACGACTAC GAAGCGCTCG CGTTCTCGCC GGCCGAGGGC
GCGCGGCTGA CCGCGAGCCT CGGCGCGAAA TCCGCGCTGC TGCTGCGCAA CCACGGCACG
CTGACGGTCG GCCGGACCGT CGCCGAAGCC TATGTGCTGA TGGATACGCT GATCAAGGCG
TGCGACATCC AGGTGCGCGC GCAGGCCGGC GGCGGACCGC TCGTGCTGCC GGCGCCGGCC
ATCGCCGAGC GCACCGCGGA ACAACTGCTC GACGGCGGCG CAATCGAAGG CGAACTGGAA
TGGCCGGCGC TGCTGCGCCG GCTCGACCGG ATCGATCCGT CGTATCGCGA CTGA
 
Protein sequence
MSFAYRPDAV KPGGPISDAE RKLRVDLAAA YRLVALNGWD DLIYTHLSAT VPGEPGHFLI 
NPFGLTFDEV RASNLVKIDL AGNRIGASEH AVNVTGFALH AAVHAARADA VCVMHLHNTA
GIAVSIQRDG LLPASQHALR FHGDLAYHDY EALAFSPAEG ARLTASLGAK SALLLRNHGT
LTVGRTVAEA YVLMDTLIKA CDIQVRAQAG GGPLVLPAPA IAERTAEQLL DGGAIEGELE
WPALLRRLDR IDPSYRD