Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_4607 |
Symbol | |
ID | 4453846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | - |
Start bp | 1581080 |
End bp | 1582234 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639696663 |
Product | porin |
Protein accession | YP_838234 |
Protein GI | 116692701 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.192363 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0218853 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCACC CCGTCATTTT TGCCGCCGCG CTCGCTGCCT TCGCCGCGCC GGCCTTTGCC GAGACCAGCG TGACGCTGTA CGGCGTGATC GACGAAGGCT TCAATTACAC GAACAACGTC AACGTCAATG GGGTCGGAAA GACCAATTAC CAGCTCGCGA GCGGCTATGC GCAGGGCAGC CGCTGGGGCC TGAAGGGCAC CGAGGATCTC GGCGGCGGGC TGAAGGCGGT CTTCACGCTG GAAAACGGTT TCGACGTGAA TAACGGCCGG CTCGGCCAGG GCGGCCGCAT GTTCGGCCGT CAGGCGTTCG TCGGGCTGTC CGAGTCGCGC TTCGGCACGC TGACCTTCGG CCGCCAGTAC GATGCGGTCG TCGACTATCT CGCGCCGCTG ACCGCGAACG GCAACTGGGG CGGCACGCTG TTCTCGCACC CGTTCGACAA CGACAACACG GACAACTCGT TCCGCGTCAA CAACACGGTC AAGTACGCGA GCGCCGACTG GAACGGCCTG ACGTTCGGCG GCACGTACAG CTTCAGCAAC AGCACGGGCT TCTCGAACAA CCGCCAGTAC AGCATCGGCG CGCAGTATTC GCTGGCCGGG CTGCAGGTCG CGGCCGCGTA CCTGCAGGCG AACAACCCGG GCATCGGCAG CGCGGGCGCG ATCGCGGCCG ACGACGCGAA CTTCGTCGCC GACCGGCTGC GCATCTTCGG CGGCGGCGTC AATTACACGT TCGGCCCGGC GACGGTCGGC GTCGTCTACA CGAAGACCGA CGTGAAGAAC CCGGTATCGA CGGTCTACCT GCCGGCGTCG ACGTTCGCCG GTCTCGGGCT GACCGCGACG AAGTTCCAGA ACTTCGAAAT CAACGGCAAG TACCAGCTCA CGCCCGATTT CTATCTCGGT GCGCAATACG TATACACGGA CGGCAAGTAC GATGCGGCGG CCGGTTCGTT CAAGCCGAAG TACCACACGG TCGGCCTGAT GGCCGACTAC AGCCTGTCGA AGCGCACCGA CGTGTACCTG CAGGGCGCGT GGCAGAAGGT GGGCGGCGAC AAGACGGGCA CGGCGGCCGA CGGCGGCTAT GTCGTCGGGA CGGACGGCCC GTCGGCGTCG TCGAACCAGT TCTCGGTGCG CGCCGCGATT CGCCACAAGT TCTGA
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Protein sequence | MKHPVIFAAA LAAFAAPAFA ETSVTLYGVI DEGFNYTNNV NVNGVGKTNY QLASGYAQGS RWGLKGTEDL GGGLKAVFTL ENGFDVNNGR LGQGGRMFGR QAFVGLSESR FGTLTFGRQY DAVVDYLAPL TANGNWGGTL FSHPFDNDNT DNSFRVNNTV KYASADWNGL TFGGTYSFSN STGFSNNRQY SIGAQYSLAG LQVAAAYLQA NNPGIGSAGA IAADDANFVA DRLRIFGGGV NYTFGPATVG VVYTKTDVKN PVSTVYLPAS TFAGLGLTAT KFQNFEINGK YQLTPDFYLG AQYVYTDGKY DAAAGSFKPK YHTVGLMADY SLSKRTDVYL QGAWQKVGGD KTGTAADGGY VVGTDGPSAS SNQFSVRAAI RHKF
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