| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_4578 |
|---|
| Symbol | |
|---|
| ID | 4453484 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | - |
|---|
| Start bp | 1545907 |
|---|
| End bp | 1547328 |
|---|
| Gene Length | 1422 bp |
|---|
| Protein Length | 473 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639696634 |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_838205 |
|---|
| Protein GI | 116692672 |
|---|
| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGCGTT ACGAACAACT GGCCGACGAT CTCCAGGCGC AGATCGAGCG GGGCGTGTAC
CGGCCCGGCG AGCGGATTCC GTCGGTGCGG CAGGCGAGCC GGCAGCAGCA GCTCAGCGTC
ACGACCGTGC TGCGCGCGTA CCTCGTGCTG GAAAGCCGCG GCCTGATCGA AAGCCGGCCG
CAGTCGGGCT ACTTCGTGCG GGCGCGCGCG GCGGCGCCGG CCGAGGCCGA GCTGCATGTC
TCCGCGCCGG CCGCCGAGCC GTCGGCCGTG GACGTGAGCC GGCTCGTGCT GTCGACGCTG
CGCTCGATCG CGCGCGACGA CGCGGTGCCG CTCGGCTCGC CGTATCCCGA CGCGTCGCAG
TTTCCGGTGC AGCGCCTCGC GCGCTATGCG CAGGCGATCG GGCGGCGCCG CACGCGCTGG
GGCGTGATCG ACGACCTGCC GCCCGGCAAC CAGGAACTGA TCCGCCAGAT CGCGCGGCGC
TATGCGGAGC GCGGAGTCGC GGTCGAGCCC GGCGAGATCG TGATGACGAT CGGCGCGACC
GAGGCGATCA ACCTGTGCCT GCAGGCGGTG GCGAAACCGG GCGACACGAT CGCGGTGGAG
TCGCCGACCT TCTATGCGAT GCTGCACGCG ATCGAGCGGA TGGGCATGCG CGCGCTGGAA
GTCGCGACGC ACCCGGGCGA CGGCATCGAT CTCGACGCGC TCGGGCGAAT CCTCGCGAAC
GAGCGCATCG CGGCCTGCAT GGTGATGCCG AACTTCCAGA ATCCGCTCGG CTTCCAGATG
CCCGATGCGC GCAAGCGCGC GCTGGTCGAA CTGCTCGCGA AGCACGGCGT GCCGGCGATC
GAGAGCGACG TCTATCACGA GCTGCACTTC GGCGATACGG CGCCGAGCGC GCTGAAGTCG
TTCGATCGCG ACGGACTGGT GCTGCATTGC GCGTCGTTCA CGAAGAGCCT GTCGCCGCGC
TACCGGATCG GCTGGGCGAT GCCGGGCCGT TACCGCGACC AGGTCGAGAA GCTGAAATTC
CTGAATACGC TCGCGACGCC CGCGATCGAG CAACTCGCGA TCGCCGAGTA CCTGAAACAC
GACGGCTACG ATTTTCACCT GCGGCGCATG CGCAAGCAGT ATGCGCAGCA GGCGAGCCTG
ATGAGCGCGA TGGTGCGGCG CTTCTTCCCG GAAGGCACGC GGCTGTCGCA GCCGCAGGGC
GGGTACGTGC TGTGGGTCGA GCTGCCGCCG CAGGTCGATG CGATGAAGCT GTACACGCTG
GCGCTCGCGC AGCGGATCAC GGTCGGGCCC GGGCACATGT TCTCGGCCGG CACCGATTAC
CGGCATTTCA TCCGGCTCAA CTACAGCTAC CCGTGGTCGC GGCAGATCGA GGACGCGCTG
AAGGTGCTGG GGCGGCTCGC GTCGGAGTGC GCGGCGCGGT GA
|
|---|
| Protein sequence | MKRYEQLADD LQAQIERGVY RPGERIPSVR QASRQQQLSV TTVLRAYLVL ESRGLIESRP
QSGYFVRARA AAPAEAELHV SAPAAEPSAV DVSRLVLSTL RSIARDDAVP LGSPYPDASQ
FPVQRLARYA QAIGRRRTRW GVIDDLPPGN QELIRQIARR YAERGVAVEP GEIVMTIGAT
EAINLCLQAV AKPGDTIAVE SPTFYAMLHA IERMGMRALE VATHPGDGID LDALGRILAN
ERIAACMVMP NFQNPLGFQM PDARKRALVE LLAKHGVPAI ESDVYHELHF GDTAPSALKS
FDRDGLVLHC ASFTKSLSPR YRIGWAMPGR YRDQVEKLKF LNTLATPAIE QLAIAEYLKH
DGYDFHLRRM RKQYAQQASL MSAMVRRFFP EGTRLSQPQG GYVLWVELPP QVDAMKLYTL
ALAQRITVGP GHMFSAGTDY RHFIRLNYSY PWSRQIEDAL KVLGRLASEC AAR
|
|---|
| |