Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_4540 |
Symbol | |
ID | 4452151 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | - |
Start bp | 1499671 |
End bp | 1500639 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639696596 |
Product | LysR family transcriptional regulator |
Protein accession | YP_838167 |
Protein GI | 116692634 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.29008 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0118827 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACATGC TCGAAAACAT GCGCCTGTTC GTGCGCGTCG TCGAAGCCGG CAGTTTTACC GCCGTCGCGA AGGAAATCGA CGCGACCACC GCGCAGGTGT CGCGCGCGGT CTCGAACCTC GAAGCCCACG TACAGACGCG CCTGCTGCAT CGCACGACCC GCCACCTCGG CCTGACCGAA AGCGGCGAGC GCTATTTCGA GCGCGCGAAA TCGATCCTCG CGGAACTCGA CTACGCGAAC GCGGAGGCGC GCAACGCGCT GCTGCGGCCG AGCGGCAAGA TGCGCATCCA TGCGATGACG GGGCTCGGGC AGAGTCATGT CGTGTCGTCG ATCGTGCGTT ACCAGGAGGA CAACCCCGAC GTGTCGGTCG AGCTGACGCT GGCGCAGCGG ATGCCGAACC TGGTCGAAGA GGGGTATGAC GTGTCGATCG TGACCGCGTC GCAGTTGCCC GATTCGGGCT ATGTCGCGCA GACCTGCGGC ACGAGCTGCA GCGTACTCGT CGCGTCGCGC GAGTATCTGG CCCGGCACGG CACGCCGCAG ACGCCCGACG AACTGCCGAA CCACGTCTGC CTGCGCCTCG ACACGCCCGC CTCGCCGGCC GGCGAATGGC GGCTCGAGCG CAGTGACGGC GAGGAAGCCG TCTACGAGCT GCAGCCGGCG CCGTTCCAGG TCAACGTGCC GGACGCGCTG TGCGTCGCGG TGCGGGCCGG CCGCGGAATC GCATGCGTGG CGCTGTATAC GGTGCTCGAC GATATCCGCG AAGGGCGCCT GATCCGCGTG CTGCCCGATT ACCGGCTGCA GACGGTGAGC GTCTATGCCG TCTACGCGAC GCGCCGCTAT CTCGATGCGA AGATCCGCAC CTTCCTCGAC CACCTGCGCA CGACGCTCAC GCCCGCGCTG GAGAACGATC TGCGCGAACT CGACCGGCTG ACGACCGAGC ACGTGCCGAG CAGCCGCCAG CGCGCGTGA
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Protein sequence | MDMLENMRLF VRVVEAGSFT AVAKEIDATT AQVSRAVSNL EAHVQTRLLH RTTRHLGLTE SGERYFERAK SILAELDYAN AEARNALLRP SGKMRIHAMT GLGQSHVVSS IVRYQEDNPD VSVELTLAQR MPNLVEEGYD VSIVTASQLP DSGYVAQTCG TSCSVLVASR EYLARHGTPQ TPDELPNHVC LRLDTPASPA GEWRLERSDG EEAVYELQPA PFQVNVPDAL CVAVRAGRGI ACVALYTVLD DIREGRLIRV LPDYRLQTVS VYAVYATRRY LDAKIRTFLD HLRTTLTPAL ENDLRELDRL TTEHVPSSRQ RA
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