Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_4510 |
Symbol | |
ID | 4452838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | + |
Start bp | 1465279 |
End bp | 1465938 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639696566 |
Product | response regulator receiver/ANTAR domain-containing protein |
Protein accession | YP_838137 |
Protein GI | 116692604 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3707] Response regulator with putative antiterminator output domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.000166869 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCCTG CGTGCATCGT CCGCCCCCTG CATCGACGCG TCCCTGCCCC TGTTGCCCGC CTCATGAGTT CGTCCGCCCT GCCCACCCGC CTGCGCGTGC TGCTCGTCAC CGACACCGAC AAGCCGATCG GCGAACTCGG CGACGCGCTC GCGCGCCTCG GCTACGAGAT GCTGAACGAC GTCGCGACGC CCGCGCGCCT GCCGGCGGCC GTCGAGGAGC AACGCCCCGA CGTCGTGATC ATCGATACCG ATTCGCCGTC GCGCGACACG CTCGAACAGC TCGCCGTCAT GCATGCGACC GCCCCGCGCC CCGTGCTGAT GTTCAGCCAC GACGCCGACC AGGAACTGAT CCGAGCGGCG GTCGGCGCGG GTGTCAGTGC GTATCTCGTC GAAGGGTTGT CGGCCGAGCG TCTCGCGCCG ATTCTCGAAG TCGCGCTCGC GCGCTTCTCG CACGACGATG CGCTGCGCCG CCGGCTGGCC GACGTCGAGC GCGAACTCGC GGAACGCAAG CTGATCGACC GTGCGAAACG CGTGCTGATG GACCAGCGCA AGCTCTCCGA ACACGATGCG TATGCGGCGC TGCGCAAGCG CGCGATGGAT CAGGGCCTGC GCATCGTCGA CGTCGCGCGA CAATTGCTCG ACGCGTCACC CCAGCCATGA
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Protein sequence | MRPACIVRPL HRRVPAPVAR LMSSSALPTR LRVLLVTDTD KPIGELGDAL ARLGYEMLND VATPARLPAA VEEQRPDVVI IDTDSPSRDT LEQLAVMHAT APRPVLMFSH DADQELIRAA VGAGVSAYLV EGLSAERLAP ILEVALARFS HDDALRRRLA DVERELAERK LIDRAKRVLM DQRKLSEHDA YAALRKRAMD QGLRIVDVAR QLLDASPQP
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