Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_4495 |
Symbol | |
ID | 4452649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | + |
Start bp | 1446004 |
End bp | 1447437 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639696551 |
Product | GntR family transcriptional regulator |
Protein accession | YP_838122 |
Protein GI | 116692589 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGCT ACGAAACCCT CGCCCATACG ATCGCCGACG ACATCCGCAA CGGCAACCTC GCGGTCGGTA CACGTCTGCC GTCGCTGCGG CAGATCATCG CGCAACATGG CGTGAGCCAG TCGACGGTGT TTCGCGCGTA TTACCTGCTC GAGCAGTGGG GGCTGATCCG CGCGCGCGAA CGCTCGGGCT ACTACGTCGC GCCGGGCGCG CAGCCGGCCA CGAGCCCGGC GACGAAACGC CGGACGAGCC GCGCGGGTGC AACGCGCAAG GTCGACATCA GCAACCTCGT GTTCTCCGTG CTCGATGCGG CCACGCAGCC CGGCATCGTG CCGCTCGGTT CCGCGTTCCC GGCGCCGCAG CTGTTTCCGC TGCCGCGCCT GGCGAAGTCG CTCGCGCAGG CCACGCGACT CGTGAGCCCG TGGAGCACGG TGGTCGACCT GCCACCCGGC AACGAAGCGC TGCGTCAGCA GATCGCGCGG CGCTATCTCG CCACCGGCAT CTCGCAACCG ATCGACGAAA TCGTCGTCAC GAACGGCGCA CTCGAAGCGC TGAACCTGTG CCTGATGGCG GTGACGCGGC CCGGCGACGT CGTCGCCGTC GAAGCACCGG GCTTCTATGC GGCGCTGCAG GCGATCGAGC GGCTCGACCT GCGCGCGGTC GAGATTCCCG TCGATCCGCG CACCGGCCTC GATCTTGATG CGCTCGCGAA CGCGCTCGAC CGGCACGCCA TCCGCGCGTG CTGGTTCATG ACCAATTTCC AGAATCCGAC CGGCGTCACG CTGACCGCCG AAAAGAAGCG CGCGCTCGTC GAATTGCTCG CGGCGCGCAA CGTGCCGCTG ATCGAGGACG ACGTGTACGG CGAACTGCAT TTCGGCCCGG ACTACCCGCT GCCCGCGCGC GCGTTCGACC GTCACGGCCT CGTGATGCAC TGCAGTTCGT TCTCGAAAAC GCTCGCGCCC GGCTACCGGA TCGGCTGGGC CGCCGCCGGC CGGTTCGCGG AGAAGGTGCA GCGGCTCAAG CTGATGACGA CGCTGTCGGC CAGCATTCCC GCGCAGGCCG GCATCGCGAA CTATCTCGAG CACGGCGGCT ACGACCGGCA CCTGCGCAAG CTGCGCGGCG CGCTGCACGC GCAGCTCGAC CGGATGGACG ACGCGCTGCG GCGCTGGCTG CCGGCCGGCG TCGAATGGGT GCGGCCCGAC GGCGGGTATT TCCTGTGGCT CGCGTTTCCC GATGCGATCG ACGCGATGGA ACTGCATCGC GAGGCGATCG AACGCGGCAT CAGCTTCGCG CCGGGGCCGC TGTTTTCGGC CGCGCACGGC TTCGAGCGCT GCGTGCGCGT GAACTTCGGC CATCCGTGGA GCCGCGACAT CGAGCGCGCG ATCCGCGTGC TCGGCGAACT GGTCGCGCAG CCGTCGGTCC GCAAGGCAGG CTGA
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Protein sequence | MKRYETLAHT IADDIRNGNL AVGTRLPSLR QIIAQHGVSQ STVFRAYYLL EQWGLIRARE RSGYYVAPGA QPATSPATKR RTSRAGATRK VDISNLVFSV LDAATQPGIV PLGSAFPAPQ LFPLPRLAKS LAQATRLVSP WSTVVDLPPG NEALRQQIAR RYLATGISQP IDEIVVTNGA LEALNLCLMA VTRPGDVVAV EAPGFYAALQ AIERLDLRAV EIPVDPRTGL DLDALANALD RHAIRACWFM TNFQNPTGVT LTAEKKRALV ELLAARNVPL IEDDVYGELH FGPDYPLPAR AFDRHGLVMH CSSFSKTLAP GYRIGWAAAG RFAEKVQRLK LMTTLSASIP AQAGIANYLE HGGYDRHLRK LRGALHAQLD RMDDALRRWL PAGVEWVRPD GGYFLWLAFP DAIDAMELHR EAIERGISFA PGPLFSAAHG FERCVRVNFG HPWSRDIERA IRVLGELVAQ PSVRKAG
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