Gene Bcen2424_4495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_4495 
Symbol 
ID4452649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp1446004 
End bp1447437 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content69% 
IMG OID639696551 
ProductGntR family transcriptional regulator 
Protein accessionYP_838122 
Protein GI116692589 
COG category[E] Amino acid transport and metabolism
[K] Transcription 
COG ID[COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCT ACGAAACCCT CGCCCATACG ATCGCCGACG ACATCCGCAA CGGCAACCTC 
GCGGTCGGTA CACGTCTGCC GTCGCTGCGG CAGATCATCG CGCAACATGG CGTGAGCCAG
TCGACGGTGT TTCGCGCGTA TTACCTGCTC GAGCAGTGGG GGCTGATCCG CGCGCGCGAA
CGCTCGGGCT ACTACGTCGC GCCGGGCGCG CAGCCGGCCA CGAGCCCGGC GACGAAACGC
CGGACGAGCC GCGCGGGTGC AACGCGCAAG GTCGACATCA GCAACCTCGT GTTCTCCGTG
CTCGATGCGG CCACGCAGCC CGGCATCGTG CCGCTCGGTT CCGCGTTCCC GGCGCCGCAG
CTGTTTCCGC TGCCGCGCCT GGCGAAGTCG CTCGCGCAGG CCACGCGACT CGTGAGCCCG
TGGAGCACGG TGGTCGACCT GCCACCCGGC AACGAAGCGC TGCGTCAGCA GATCGCGCGG
CGCTATCTCG CCACCGGCAT CTCGCAACCG ATCGACGAAA TCGTCGTCAC GAACGGCGCA
CTCGAAGCGC TGAACCTGTG CCTGATGGCG GTGACGCGGC CCGGCGACGT CGTCGCCGTC
GAAGCACCGG GCTTCTATGC GGCGCTGCAG GCGATCGAGC GGCTCGACCT GCGCGCGGTC
GAGATTCCCG TCGATCCGCG CACCGGCCTC GATCTTGATG CGCTCGCGAA CGCGCTCGAC
CGGCACGCCA TCCGCGCGTG CTGGTTCATG ACCAATTTCC AGAATCCGAC CGGCGTCACG
CTGACCGCCG AAAAGAAGCG CGCGCTCGTC GAATTGCTCG CGGCGCGCAA CGTGCCGCTG
ATCGAGGACG ACGTGTACGG CGAACTGCAT TTCGGCCCGG ACTACCCGCT GCCCGCGCGC
GCGTTCGACC GTCACGGCCT CGTGATGCAC TGCAGTTCGT TCTCGAAAAC GCTCGCGCCC
GGCTACCGGA TCGGCTGGGC CGCCGCCGGC CGGTTCGCGG AGAAGGTGCA GCGGCTCAAG
CTGATGACGA CGCTGTCGGC CAGCATTCCC GCGCAGGCCG GCATCGCGAA CTATCTCGAG
CACGGCGGCT ACGACCGGCA CCTGCGCAAG CTGCGCGGCG CGCTGCACGC GCAGCTCGAC
CGGATGGACG ACGCGCTGCG GCGCTGGCTG CCGGCCGGCG TCGAATGGGT GCGGCCCGAC
GGCGGGTATT TCCTGTGGCT CGCGTTTCCC GATGCGATCG ACGCGATGGA ACTGCATCGC
GAGGCGATCG AACGCGGCAT CAGCTTCGCG CCGGGGCCGC TGTTTTCGGC CGCGCACGGC
TTCGAGCGCT GCGTGCGCGT GAACTTCGGC CATCCGTGGA GCCGCGACAT CGAGCGCGCG
ATCCGCGTGC TCGGCGAACT GGTCGCGCAG CCGTCGGTCC GCAAGGCAGG CTGA
 
Protein sequence
MKRYETLAHT IADDIRNGNL AVGTRLPSLR QIIAQHGVSQ STVFRAYYLL EQWGLIRARE 
RSGYYVAPGA QPATSPATKR RTSRAGATRK VDISNLVFSV LDAATQPGIV PLGSAFPAPQ
LFPLPRLAKS LAQATRLVSP WSTVVDLPPG NEALRQQIAR RYLATGISQP IDEIVVTNGA
LEALNLCLMA VTRPGDVVAV EAPGFYAALQ AIERLDLRAV EIPVDPRTGL DLDALANALD
RHAIRACWFM TNFQNPTGVT LTAEKKRALV ELLAARNVPL IEDDVYGELH FGPDYPLPAR
AFDRHGLVMH CSSFSKTLAP GYRIGWAAAG RFAEKVQRLK LMTTLSASIP AQAGIANYLE
HGGYDRHLRK LRGALHAQLD RMDDALRRWL PAGVEWVRPD GGYFLWLAFP DAIDAMELHR
EAIERGISFA PGPLFSAAHG FERCVRVNFG HPWSRDIERA IRVLGELVAQ PSVRKAG