Gene Bcen2424_4380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_4380 
Symbol 
ID4451568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand+ 
Start bp1325658 
End bp1326296 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content71% 
IMG OID639696436 
Producthypothetical protein 
Protein accessionYP_838007 
Protein GI116692474 
COG category[S] Function unknown 
COG ID[COG3652] Predicted outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.116285 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.971701 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACAA ACCGAACAAT CCGGAGGATG AAGCGGGGCG GGCGTCGGCC AGTGGCGGTC 
GTCACGCTGA CTGCCGCCGC CGGCGTCCTG ACGTTCGCGT TCTCGCACGC GCAAGCGCCG 
CCCGCTTCGT CCGCGCAGGT CGCGCCGGGC GTCATCCGTC CCGGCCCCAC CGCCGACGAG 
CCCGGCCTGA CGCAGCGGCC GATCGGCATC GACGCCGAGT TCGTCGACAA GGCGGGCATG 
CTCGGCAAGG TGGAGCGACA GGCCAGCCAA CTCGCGCTCG ACCGTTCGTC GAACGCGGAC 
GTGAAGGCCT TCGCGCGCCG AATGCTCGAC GATCACGCGC GTATCGCGGA CGAATTGCGC 
CACATCGGTG CGCAGAAAGG CGTGCCGGTC CAGACGCGGA TGCTCGTCGA TCCGGCGGTC 
ACGGCATTGC GAGCGAAGGA CGGGCGCGCG TTCGATACGG CGTACGTGGC GCTGGCCGGG 
CCGAGCGCCC ACGAAGCGGC GATCCGGCTT TACGAAACCG AGGCGAAAGA CGGCCGCGAC 
CCGCAGCTTC GCGCGTTCGC GGCCCGCACG CTGCCGGTGT TGAACGCACA CCTGAACGCC 
GCGCGGCAAC TCGCGAAGAG GGTGGCCGCC GCGCAGTGA
 
Protein sequence
MSTNRTIRRM KRGGRRPVAV VTLTAAAGVL TFAFSHAQAP PASSAQVAPG VIRPGPTADE 
PGLTQRPIGI DAEFVDKAGM LGKVERQASQ LALDRSSNAD VKAFARRMLD DHARIADELR 
HIGAQKGVPV QTRMLVDPAV TALRAKDGRA FDTAYVALAG PSAHEAAIRL YETEAKDGRD 
PQLRAFAART LPVLNAHLNA ARQLAKRVAA AQ